RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMG7-208ENST00000493609 STT3BQ8TCJ2 826 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 TBC1D5Q92609 795 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 UROC1Q96N76 676 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 BBC3Q96PG8 261 aaPredicted RBP6.74□□□□□ -1.33
SMG7-208ENST00000493609 MMS19Q96T76 1030 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 TIMP4Q99727 224 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 CIPCQ9C0C6 399 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 MYLK2Q9H1R3 596 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 USP29Q9HBJ7 922 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 SNX15Q9NRS6 342 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 HERC5Q9UII4 1024 aaKnown RBP6.74□□□□□ -1.33
SMG7-208ENST00000493609 PCDHB2Q9Y5E7 798 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 PCDHGB3Q9Y5G1 929 aa6.74□□□□□ -1.33
SMG7-208ENST00000493609 M0QZQ0 153 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 IPO5O00410 1097 aaKnown RBP6.73□□□□□ -1.33
SMG7-208ENST00000493609 CTIFO43310 598 aaKnown RBP6.73□□□□□ -1.33
SMG7-208ENST00000493609 CER1O95813 267 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 ALADP13716 330 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 DGKQP52824 942 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 COPB1P53618 953 aaKnown RBP6.73□□□□□ -1.33
SMG7-208ENST00000493609 PNLIPRP1P54315 467 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 FOXO1Q12778 655 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 SEMA3BQ13214 749 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 DNASE1L3Q13609 305 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 POSTNQ15063 836 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 CCDC144NLQ6NUI1 221 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 KLHL17Q6TDP4 642 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 SFTPA1Q8IWL2 248 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 CLASRPQ8N2M8 674 aaKnown RBP6.73□□□□□ -1.33
SMG7-208ENST00000493609 PNPLA1Q8N8W4 532 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 TERB1Q8NA31 727 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 NGDNQ8NEJ9 315 aaKnown RBP6.73□□□□□ -1.33
SMG7-208ENST00000493609 SCAMP5Q8TAC9 235 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 EIF3CQ99613 913 aaKnown RBP6.73□□□□□ -1.33
SMG7-208ENST00000493609 PAGR1Q9BTK6 254 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 SLITRK6Q9H5Y7 841 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 VPS45Q9NRW7 570 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 SH3BP4Q9P0V3 963 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 VPS4AQ9UN37 437 aa6.73□□□□□ -1.33
SMG7-208ENST00000493609 PRAMEF2O60811 474 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 RPP40O75818 363 aaKnown RBP6.72□□□□□ -1.33
SMG7-208ENST00000493609 ACTL6BO94805 426 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 ZNF37AP17032 561 aaPredicted RBP6.72□□□□□ -1.33
SMG7-208ENST00000493609 ZRSR2Q15696 482 aaKnown RBP6.72□□□□□ -1.33
SMG7-208ENST00000493609 CEP85Q6P2H3 762 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 ZNF804AQ7Z570 1209 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 BCDIN3DQ7Z5W3 292 aaKnown RBP6.72□□□□□ -1.33
SMG7-208ENST00000493609 CCDC117Q8IWD4 279 aaPredicted RBP6.72□□□□□ -1.33
SMG7-208ENST00000493609 SPATA5Q8NB90 893 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 SLC22A17Q8WUG5 538 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 REPS1Q96D71 796 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 RTKNQ9BST9 563 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 POLR3GLQ9BT43 218 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 TMEM120AQ9BXJ8 343 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 PABPC3Q9H361 631 aaKnown RBP6.72□□□□□ -1.33
SMG7-208ENST00000493609 PCDHB7Q9Y5E2 793 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 UNC13AQ9UPW8 1703 aa6.72□□□□□ -1.33
SMG7-208ENST00000493609 KIF28PB7ZC32 967 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 TMIGD3P0DMS9 266 aaPredicted RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 APEHP13798 732 aaKnown RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 WT1P19544 449 aaPredicted RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 GPC5P78333 572 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 TXNL4AP83876 142 aaKnown RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 PRKG1Q13976 671 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 ATPAF1Q5TC12 328 aaPredicted RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 DENND2CQ68D51 928 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 KRT27Q7Z3Y8 459 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 SLC44A2Q8IWA5 706 aaPredicted RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 C12orf76Q8N812 135 aaPredicted RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 FAM71DQ8N9W8 422 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 OTUD7AQ8TE49 926 aaPredicted RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 WDR60Q8WVS4 1066 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 TRAPPC12Q8WVT3 735 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 TBC1D20Q96BZ9 403 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 EDC3Q96F86 508 aaKnown RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 PRDM13Q9H4Q3 707 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 PRDM8Q9NQV8 689 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 ASIC5Q9NY37 505 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 INSL6Q9Y581 213 aa6.71□□□□□ -1.34
SMG7-208ENST00000493609 WDR33Q9C0J8 1336 aaKnown RBP6.71□□□□□ -1.34
SMG7-208ENST00000493609 CCDC187A0A096LP49 1063 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 FAM90A18PA6NE21 464 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 FAM90A16PA6NEW6 464 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 FAM90A9PA6NNJ1 464 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 FAM90A5PA8MXJ8 464 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 PPP6R2O75170 966 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 MBPP02686 304 aaPredicted RBP6.7□□□□□ -1.34
SMG7-208ENST00000493609 FAM90A15PP0C7V4 464 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 FAM90A14PP0C7W9 464 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 GPD1P21695 349 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 GALNSP34059 522 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 RENBPP51606 427 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 AP2B1P63010 937 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 CCDC15Q0P6D6 951 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 TANGO2Q6ICL3 276 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 LDHAL6AQ6ZMR3 332 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 TRIM72Q6ZMU5 477 aa6.7□□□□□ -1.34
SMG7-208ENST00000493609 SUGP1Q8IWZ8 645 aaKnown RBP6.7□□□□□ -1.34
SMG7-208ENST00000493609 MAFAQ8NHW3 353 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms