RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	SLC14A2	Q15849	920 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	IFI16	Q16666	785 aa	Known RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	FAM187B	Q17R55	369 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	CT83	Q5H943	113 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	FAM26F	Q5R3K3	315 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	ATF7IP2	Q5U623	682 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	ZNF468	Q5VIY5	522 aa	Predicted RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	FAM205BP	Q63HN1	556 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	E4F1	Q66K89	784 aa	Predicted RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	FAM117B	Q6P1L5	589 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	GLB1L	Q6UWU2	654 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	ZPBP2	Q6X784	338 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	CLEC17A	Q6ZS10	378 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	UNC13D	Q70J99	1090 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	SLC24A5	Q71RS6	500 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	HAUS6	Q7Z4H7	955 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	LRRTM4	Q86VH4	590 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	ECHDC2	Q86YB7	292 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	LRRC43	Q8N309	656 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	RNF169	Q8NCN4	708 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	LINC01599	Q8WXQ3	324 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	C18orf8	Q96DM3	657 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	CPB2	Q96IY4	423 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	FBXL18	Q96ME1	805 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	ZMAT2	Q96NC0	199 aa	Known RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	FANCD2OS	Q96PS1	177 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	LSM14B	Q9BX40	385 aa	Known RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	MRPL9	Q9BYD2	267 aa	Known RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	FOXQ1	Q9C009	403 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	SEMA4A	Q9H3S1	761 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	ELAC1	Q9H777	363 aa	Known RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	BRD9	Q9H8M2	597 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	MINDY3	Q9H8M7	445 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	MRPL44	Q9H9J2	332 aa	Known RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	RGS18	Q9NS28	235 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	FAM105A	Q9NUU6	356 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	PANK4	Q9NVE7	773 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	RMND1	Q9NWS8	449 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	TMEM161A	Q9NX61	479 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	CEP72	Q9P209	647 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	ANKFY1	Q9P2R3	1169 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	GIMAP2	Q9UG22	337 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	MSRA	Q9UJ68	235 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	RNF112	Q9ULX5	631 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	EDAR	Q9UNE0	448 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	SRPK3	Q9UPE1	567 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	EXOC7	Q9UPT5	735 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	SF3B6	Q9Y3B4	125 aa	Known RBP	4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	SNX13	Q9Y5W8	968 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	CENPF	P49454	3210 aa		4.68	□□□□□ -1.66
SFPQ-210	ENST00000490668	TRIP12	Q14669	1992 aa	Predicted RBP	4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	ZMYM2	Q9UBW7	1377 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	MICAL3	Q7RTP6	2002 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668		A0A0U1RQF3	1178 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	PVALEF	A0A1B0GWK0	134 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	FAM170A	A1A519	330 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	FRMD3	A2A2Y4	597 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	C2orf71	A6NGG8	1288 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	CCDC154	A6NI56	674 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	FAM47E-STBD1	D6RA91	191 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	C2CD2L	O14523	706 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	KCNK3	O14649	394 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	GSTA4	O15217	222 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	EIF3D	O15371	548 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	HTRA2	O43464	458 aa	Predicted RBP	4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	MAN1A2	O60476	641 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	SKAP2	O75563	359 aa	Predicted RBP	4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	TOM1L1	O75674	476 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	ZNF202	O95125	648 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	KIF20A	O95235	890 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	SMC2	O95347	1197 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	EOMES	O95936	686 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	CA3	P07451	260 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	CLEC2L	P0C7M8	214 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	GRK3	P35626	688 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	ADH7	P40394	386 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	MLH1	P40692	756 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	MATR3	P43243	847 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	MAN2A2	P49641	1150 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	ITGA8	P53708	1063 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	NR1H2	P55055	460 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	PCBP4	P57723	403 aa	Known RBP	4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	KRT83	P78385	493 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	FOXO1	Q12778	655 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	KCNAB2	Q13303	367 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	CUL4B	Q13620	913 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	BTG3	Q14201	252 aa	Predicted RBP	4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	CCNG2	Q16589	344 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	MEA1	Q16626	185 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	PFKFB4	Q16877	469 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	TCTN1	Q2MV58	587 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	C3orf36	Q3SXR2	165 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	ZACN	Q401N2	412 aa		4.67	□□□□□ -1.66
SFPQ-210	ENST00000490668	HABP4	Q5JVS0	413 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms