RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 ZNF484Q5JVG2 852 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.7□□□□□ -0.381e-7■■■□□ 17.4
ABCA2-218ENST00000487109 IGF2BP3O00425 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
ABCA2-218ENST00000487109 CRTAMO95727 393 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 HIST1H2ABP04908 130 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 CYP2C9P11712 490 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 GARTP22102 1010 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
ABCA2-218ENST00000487109 IL2P60568 153 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 OTUD4Q01804 1114 aaKnown RBP12.7□□□□□ -0.38
ABCA2-218ENST00000487109 ALG11Q2TAA5 492 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 SEL1L3Q68CR1 1132 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 HIST3H2AQ7L7L0 130 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 HIST1H2ACQ93077 130 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 PCDHB2Q9Y5E7 798 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
ABCA2-218ENST00000487109 KRT33AO76009 404 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 RHOBTB3O94955 611 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 RXRGP48443 463 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ITGA8P53708 1063 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 AMPD2Q01433 879 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 CRYMQ14894 314 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 FAM228AQ86W67 206 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ARRDC4Q8NCT1 418 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 KAT2BQ92831 832 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ADGRG1Q9Y653 693 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
ABCA2-218ENST00000487109 HALP42357 657 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 VAC14Q08AM6 782 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ITGA9Q13797 1035 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 MIIPQ5JXC2 388 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 CYP20A1Q6UW02 462 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 LRRC74BQ6ZQY2 392 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 FBXO33Q7Z6M2 555 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 HIC2Q96JB3 615 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 NDOR1Q9UHB4 597 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 CKBP12277 381 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 UQCRBP14927 111 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 NECAB2Q7Z6G3 386 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 SH2D3CQ8N5H7 860 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 CHORDC1Q9UHD1 332 aaPredicted RBP12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ENOPH1Q9UHY7 261 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 IQCMA0A1B0GVH7 501 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 TAF4O00268 1085 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 NKRFO15226 690 aaKnown RBP eCLIP12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ATG7O95352 703 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 MED26O95402 600 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ITGA1P56199 1179 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ILF2Q12905 390 aaKnown RBP12.69□□□□□ -0.38
ABCA2-218ENST00000487109 MTM1Q13496 603 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ZSCAN18Q8TBC5 510 aaPredicted RBP12.69□□□□□ -0.38
ABCA2-218ENST00000487109 SGF29Q96ES7 293 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 CDK5RAP1Q96SZ6 601 aaKnown RBP12.69□□□□□ -0.38
ABCA2-218ENST00000487109 FAM118BQ9BPY3 351 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 PRKD2Q9BZL6 878 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 UBA2Q9UBT2 640 aaPredicted RBP12.69□□□□□ -0.38
ABCA2-218ENST00000487109 NCOA3Q9Y6Q9 1424 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 CST8O60676 142 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 NPTXRO95502 500 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 LSP1P33241 339 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 SLC26A2P50443 739 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 PDGFCQ9NRA1 345 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 KIAA1257Q9ULG3 409 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 TMEM114B3SHH9 223 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 SKP1P63208 163 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 CENPCQ03188 943 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 DENND5BQ6ZUT9 1274 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 ZNF671Q8TAW3 534 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 GJB4Q9NTQ9 266 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 COPG2Q9UBF2 871 aa12.69□□□□□ -0.38
ABCA2-218ENST00000487109 PPRC1Q5VV67 1664 aaKnown RBP12.69□□□□□ -0.38
ABCA2-218ENST00000487109 CCT8L1PA6NM43 557 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 H3BN98 237 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 KCNQ2O43526 872 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 MSH3P20585 1137 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 PSMB9P28065 219 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 PSMD4P55036 377 aaKnown RBP12.68□□□□□ -0.38
ABCA2-218ENST00000487109 PCSK9Q8NBP7 692 aaKnown RBP12.68□□□□□ -0.38
ABCA2-218ENST00000487109 FEZF2Q8TBJ5 459 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 SKA1Q96BD8 255 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 ELOVL6Q9H5J4 265 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 GPRC5DQ9NZD1 345 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 COMMD9Q9P000 198 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 TDRKHQ9Y2W6 561 aaKnown RBP12.68□□□□□ -0.38
ABCA2-218ENST00000487109 RPS6KL1Q9Y6S9 549 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 GTF2H1P32780 548 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 TGFBR2P37173 567 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 GALCP54803 685 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 EZH2Q15910 746 aaKnown RBP12.68□□□□□ -0.38
ABCA2-218ENST00000487109 SVOPQ8N4V2 548 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 MRPS31Q92665 395 aaKnown RBP12.68□□□□□ -0.38
ABCA2-218ENST00000487109 FBXO32Q969P5 355 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 MIEF2Q96C03 454 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 YME1L1Q96TA2 773 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 HMG20AQ9NP66 347 aa12.68□□□□□ -0.38
ABCA2-218ENST00000487109 STK39Q9UEW8 545 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms