RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 SAP30LQ9HAJ7 183 aa4.71□□□□□ -1.66
GCFC2-209ENST00000486016 DDX20Q9UHI6 824 aaKnown RBP4.71□□□□□ -1.66
GCFC2-209ENST00000486016 NOTCH4Q99466 2003 aa4.71□□□□□ -1.66
GCFC2-209ENST00000486016 CBFA2T3O75081 653 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 INMTO95050 263 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 TMIGD3P0DMS9 266 aaPredicted RBP4.7□□□□□ -1.66
GCFC2-209ENST00000486016 U2AF1L5P0DN76 240 aaPredicted RBP4.7□□□□□ -1.66
GCFC2-209ENST00000486016 IDUAP35475 653 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 CACNB3P54284 484 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 U2AF1Q01081 240 aaKnown RBP eCLIP4.7□□□□□ -1.66
GCFC2-209ENST00000486016 SEMA3AQ14563 771 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 NFE2Q16621 373 aaPredicted RBP4.7□□□□□ -1.66
GCFC2-209ENST00000486016 AASDHQ4L235 1098 aaPredicted RBP4.7□□□□□ -1.66
GCFC2-209ENST00000486016 MZT2AQ6P582 158 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 CHST15Q7LFX5 561 aaPredicted RBP4.7□□□□□ -1.66
GCFC2-209ENST00000486016 TCEAL8Q8IYN2 117 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 MAGEB6Q8N7X4 407 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 MBD3L2Q8NHZ7 208 aaPredicted RBP4.7□□□□□ -1.66
GCFC2-209ENST00000486016 SUN3Q8TAQ9 357 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 FCRL5Q96RD9 977 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 MLXIPQ9HAP2 919 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 NOB1Q9ULX3 412 aaKnown RBP4.7□□□□□ -1.66
GCFC2-209ENST00000486016 HPSEQ9Y251 543 aa4.7□□□□□ -1.66
GCFC2-209ENST00000486016 IGLV5-39A0A0G2JS06 123 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 SLC22A23A1A5C7 686 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 SNX2O60749 519 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 EPN2O95208 641 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 MT-ND5P03915 603 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 TMEM225BP0DP42 221 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 CARSP49589 748 aaKnown RBP4.69□□□□□ -1.66
GCFC2-209ENST00000486016 JAK3P52333 1124 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 WDR5P61964 334 aaKnown RBP4.69□□□□□ -1.66
GCFC2-209ENST00000486016 IGBP1P78318 339 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 RAE1P78406 368 aaKnown RBP4.69□□□□□ -1.66
GCFC2-209ENST00000486016 CCDC15Q0P6D6 951 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 CYB5RLQ6IPT4 315 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 DLK2Q6UY11 383 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 FAM156AQ8NDB6 213 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 SMCR8Q8TEV9 937 aaPredicted RBP4.69□□□□□ -1.66
GCFC2-209ENST00000486016 CINPQ9BW66 212 aaPredicted RBP4.69□□□□□ -1.66
GCFC2-209ENST00000486016 SCNM1Q9BWG6 230 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 LRRC27Q9C0I9 530 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 HIPK2Q9H2X6 1198 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 FAM204AQ9H8W3 233 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 TMEM45AQ9NWC5 275 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 WWOXQ9NZC7 414 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 OGDHLQ9ULD0 1010 aa4.69□□□□□ -1.66
GCFC2-209ENST00000486016 SIRT4Q9Y6E7 314 aaPredicted RBP4.69□□□□□ -1.66
GCFC2-209ENST00000486016 A0A0G2JK05 382 aa4.68□□□□□ -1.66
GCFC2-209ENST00000486016 CD63P08962 238 aa4.68□□□□□ -1.66
GCFC2-209ENST00000486016 RPS6KB1P23443 525 aa4.68□□□□□ -1.66
GCFC2-209ENST00000486016 KCNJ12Q14500 433 aa4.68□□□□□ -1.66
GCFC2-209ENST00000486016 ZNF549Q6P9A3 640 aa4.68□□□□□ -1.66
GCFC2-209ENST00000486016 RBM44Q6ZP01 1051 aaKnown RBP4.68□□□□□ -1.66
GCFC2-209ENST00000486016 FAM57BQ71RH2 274 aa4.68□□□□□ -1.66
GCFC2-209ENST00000486016 B4GALNT2Q8NHY0 566 aa4.68□□□□□ -1.66
GCFC2-209ENST00000486016 ZNF287Q9HBT7 754 aa4.68□□□□□ -1.66
GCFC2-209ENST00000486016 ITGB1BP2Q9UKP3 347 aa4.68□□□□□ -1.66
GCFC2-209ENST00000486016 A0A087WZ62 844 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 TRBV5-3A0A0A0MS03 114 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 F8W8V4 182 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 FOXN3O00409 490 aaPredicted RBP4.67□□□□□ -1.66
GCFC2-209ENST00000486016 GOLIM4O00461 696 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 ATG13O75143 517 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 WDR47O94967 919 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 MAP4K4O95819 1239 aaPredicted RBP4.67□□□□□ -1.66
GCFC2-209ENST00000486016 SCGB1D2O95969 90 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 ZBED1O96006 694 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 GAB1Q13480 694 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 DAB2IPQ5VWQ8 1189 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 LVRNQ6Q4G3 990 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 ZNF793Q6ZN11 406 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 SMRP1Q8NCR6 262 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 WDR24Q96S15 920 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 ABHD10Q9NUJ1 306 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 MSRB1Q9NZV6 116 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 PCDHA12Q9UN75 941 aa4.67□□□□□ -1.66
GCFC2-209ENST00000486016 PRYO14603 147 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 TPP1O14773 563 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 PBX1P40424 430 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 SOX2P48431 317 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 GALEQ14376 348 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 ARHGAP29Q52LW3 1261 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 ODR4Q5SWX8 454 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 TTLL5Q6EMB2 1281 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 SRGAP1Q7Z6B7 1085 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 RFX6Q8HWS3 928 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 KRT78Q8N1N4 520 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 SLC25A28Q96A46 364 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 SNX22Q96L94 193 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 CTAGE1Q96RT6 745 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 ZCWPW1Q9H0M4 648 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 ARL8BQ9NVJ2 186 aa4.66□□□□□ -1.66
GCFC2-209ENST00000486016 CTIFO43310 598 aaKnown RBP4.65□□□□□ -1.67
GCFC2-209ENST00000486016 ARP10275 920 aa4.65□□□□□ -1.67
GCFC2-209ENST00000486016 KRTAP5-9P26371 169 aa4.65□□□□□ -1.67
GCFC2-209ENST00000486016 CDKN2AP42771 156 aaKnown RBP4.65□□□□□ -1.67
GCFC2-209ENST00000486016 MANEAQ5SRI9 462 aa4.65□□□□□ -1.67
GCFC2-209ENST00000486016 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
GCFC2-209ENST00000486016 DARS2Q6PI48 645 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms