RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 TBC1D5Q92609 795 aa9.98□□□□□ -0.81
CUL3-209ENST00000481135 SDCCAG3Q96C92 435 aa9.98□□□□□ -0.81
CUL3-209ENST00000481135 FAR2Q96K12 515 aa9.98□□□□□ -0.81
CUL3-209ENST00000481135 TFCP2L1Q9NZI6 479 aa9.98□□□□□ -0.81
CUL3-209ENST00000481135 NDUFAF4Q9P032 175 aa9.98□□□□□ -0.81
CUL3-209ENST00000481135 ST3GAL5Q9UNP4 418 aa9.98□□□□□ -0.81
CUL3-209ENST00000481135 CNTN6Q9UQ52 1028 aa9.98□□□□□ -0.81
CUL3-209ENST00000481135 HS3ST3A1Q9Y663 406 aa9.98□□□□□ -0.81
CUL3-209ENST00000481135 PPP6R2O75170 966 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 FAM155BO75949 473 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 ADD2P35612 726 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 BUD31P41223 144 aaPredicted RBP9.97□□□□□ -0.81
CUL3-209ENST00000481135 AARSP49588 968 aaKnown RBP eCLIP9.97□□□□□ -0.81
CUL3-209ENST00000481135 CCDC15Q0P6D6 951 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 DNASE1L3Q13609 305 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 TAF12Q16514 161 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 ZNF627Q7L945 461 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 MOGAT3Q86VF5 341 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 FAM71DQ8N9W8 422 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 SLC22A17Q8WUG5 538 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 HMGB4Q8WW32 186 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 REXO5Q96IC2 774 aaKnown RBP9.97□□□□□ -0.81
CUL3-209ENST00000481135 LENG8Q96PV6 779 aaPredicted RBP9.97□□□□□ -0.81
CUL3-209ENST00000481135 VPS16Q9H269 839 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 DAPP1Q9UN19 280 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 SALL3Q9BXA9 1300 aa9.97□□□□□ -0.81
CUL3-209ENST00000481135 GXYLT2A0PJZ3 443 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 FAM90A18PA6NE21 464 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 FAM90A16PA6NEW6 464 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 FAM90A9PA6NNJ1 464 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 FAM90A5PA8MXJ8 464 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 GCP02774 474 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 FAM90A15PP0C7V4 464 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 FAM90A14PP0C7W9 464 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 CXCR5P32302 372 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 RARRES1P49788 294 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 SLC29A4Q7RTT9 530 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 FTSJ3Q8IY81 847 aaKnown RBP9.96□□□□□ -0.82
CUL3-209ENST00000481135 CAGE1Q8TC20 777 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 CCDC134Q9H6E4 229 aa9.96□□□□□ -0.82
CUL3-209ENST00000481135 LIN7CQ9NUP9 197 aaKnown RBP9.96□□□□□ -0.82
CUL3-209ENST00000481135 KRTAP9-7A8MTY7 169 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 CA12O43570 354 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 MAPK9P45984 424 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 DIO1P49895 249 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 PAPOLAP51003 745 aaKnown RBP9.95□□□□□ -0.82
CUL3-209ENST00000481135 DEUP1Q05D60 604 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 SF3A3Q12874 501 aaKnown RBP eCLIP9.95□□□□□ -0.82
CUL3-209ENST00000481135 TBRG1Q3YBR2 411 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 FBXO47Q5MNV8 452 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 LCE4AQ5TA78 99 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 TTC22Q5TAA0 569 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 USP29Q9HBJ7 922 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 ASAP1Q9ULH1 1129 aa9.95□□□□□ -0.82
CUL3-209ENST00000481135 KIF28PB7ZC32 967 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 H0Y3Z8 333 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 FOXN1O15353 648 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 TMIGD3P0DMS9 266 aaPredicted RBP9.94□□□□□ -0.82
CUL3-209ENST00000481135 DRD4P21917 467 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 IGHMBP2P38935 993 aaKnown RBP9.94□□□□□ -0.82
CUL3-209ENST00000481135 SOX10P56693 466 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 KRTAP10-2P60368 255 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 SIM1P81133 766 aaPredicted RBP9.94□□□□□ -0.82
CUL3-209ENST00000481135 LMAN2Q12907 356 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 RRAGAQ7L523 313 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 AMER2Q8N7J2 671 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 C12orf76Q8N812 135 aaPredicted RBP9.94□□□□□ -0.82
CUL3-209ENST00000481135 THAP7Q9BT49 309 aaPredicted RBP9.94□□□□□ -0.82
CUL3-209ENST00000481135 SLC17A6Q9P2U8 582 aa9.94□□□□□ -0.82
CUL3-209ENST00000481135 SUV39H1O43463 412 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 MATN1P21941 496 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 SERPINA4P29622 427 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 THBS4P35443 961 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 MCM2P49736 904 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 PSG6Q00889 435 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 ALFQ53S48 1182 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 KIRREL2Q6UWL6 708 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 CYP26C1Q6V0L0 522 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 DBX2Q6ZNG2 339 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 RASAL3Q86YV0 1011 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 AFG1LQ8WV93 481 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 GOLGA1Q92805 767 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 PYM1Q9BRP8 204 aaKnown RBP9.93□□□□□ -0.82
CUL3-209ENST00000481135 TMLHEQ9NVH6 421 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 PCDHB7Q9Y5E2 793 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 ENTPD2Q9Y5L3 495 aa9.93□□□□□ -0.82
CUL3-209ENST00000481135 RAMP2O60895 175 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 ELFN1P0C7U0 828 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 ACTR2P61160 394 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 CUL4BQ13620 913 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 EFR3AQ14156 821 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 TSTD2Q5T7W7 516 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 CEP85Q6P2H3 762 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 ACSM6Q6P461 480 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 C2CD5Q86YS7 1000 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 SUGP1Q8IWZ8 645 aaKnown RBP9.92□□□□□ -0.82
CUL3-209ENST00000481135 OR52L2PQ8NGH6 319 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 SAP30LQ9HAJ7 183 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 KCNK9Q9NPC2 374 aa9.92□□□□□ -0.82
CUL3-209ENST00000481135 VPS45Q9NRW7 570 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms