RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 FOXR1Q6PIV2 292 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 OR2T3Q8NH03 318 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 HPS3Q969F9 1004 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 ATXN7L3BQ96GX2 97 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 ESYT1Q9BSJ8 1104 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 MARK1Q9P0L2 795 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 WDR35Q9P2L0 1181 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 PCDHGA8Q9Y5G5 932 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 CSMD2Q7Z408 3487 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 CKAP5Q14008 2032 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 MED13Q9UHV7 2174 aa12.62□□□□□ -0.39
USP11-208ENST00000480104 WNT9AO14904 365 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 EPHX1P07099 455 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 HMGB1P09429 215 aaKnown RBP12.61□□□□□ -0.39
USP11-208ENST00000480104 RNF224P0DH78 156 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 ACO1P21399 889 aaKnown RBP12.61□□□□□ -0.39
USP11-208ENST00000480104 BDNFP23560 247 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 CD38P28907 300 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 PDIA3P30101 505 aaKnown RBP12.61□□□□□ -0.39
USP11-208ENST00000480104 NXPH1P58417 271 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 CYP4F2P78329 520 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 MAPK7Q13164 816 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 ZNF211Q13398 564 aaPredicted RBP12.61□□□□□ -0.39
USP11-208ENST00000480104 ZNF234Q14588 700 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 KYAT1Q16773 422 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 OSTM1Q86WC4 334 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 TMEM161BQ8NDZ6 487 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 MYLPFQ96A32 169 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 MIB2Q96AX9 1013 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 FUCA2Q9BTY2 467 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 OSBPL2Q9H1P3 480 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 EBF2Q9HAK2 575 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 GJB4Q9NTQ9 266 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 DPP3Q9NY33 737 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 PLK2Q9NYY3 685 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 DERAQ9Y315 318 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 PLXNA2O75051 1894 aa12.61□□□□□ -0.39
USP11-208ENST00000480104 FAM47DPA6NHR8 397 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 OGTO15294 1046 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 LZTS3O60299 673 aaPredicted RBP12.6□□□□□ -0.39
USP11-208ENST00000480104 ATP2C2O75185 946 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 RTN2O75298 545 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 TNFSF15O95150 251 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 MAPTP10636 758 aaKnown RBP12.6□□□□□ -0.39
USP11-208ENST00000480104 ANXA13P27216 316 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 NOP14P78316 857 aaKnown RBP12.6□□□□□ -0.39
USP11-208ENST00000480104 TGIF1Q15583 401 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 ECM1Q16610 540 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 GEN1Q17RS7 908 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 TSGA10IPQ3SY00 556 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 VSTM1Q6UX27 236 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 C4orf50Q6ZRC1 276 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 TMC6Q7Z403 805 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 CD302Q8IX05 232 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 ARL14Q8N4G2 192 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 OXR1Q8N573 874 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 SSC4DQ8WTU2 575 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 HTR3CQ8WXA8 447 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 SORCS1Q8WY21 1168 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 BICD1Q96G01 975 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 P2RY11Q96G91 374 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 CEP295NLQ96MC4 621 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 SLITRK1Q96PX8 696 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 TMEM60Q9H2L4 133 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 EHD2Q9NZN4 543 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 ANAPC2Q9UJX6 822 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 TCHHQ07283 1943 aa12.6□□□□□ -0.39
USP11-208ENST00000480104 NIPBLQ6KC79 2804 aaeCLIP12.6□□□□□ -0.39
USP11-208ENST00000480104 PRRC2CQ9Y520 2896 aaKnown RBP12.59□□□□□ -0.39
USP11-208ENST00000480104 VPS37CA5D8V6 355 aaPredicted RBP12.59□□□□□ -0.39
USP11-208ENST00000480104 SFI1A8K8P3 1242 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 F8VP50 259 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 NOBOXO60393 691 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 GREM1O60565 184 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 PSMC1P62191 440 aaKnown RBP12.59□□□□□ -0.39
USP11-208ENST00000480104 IFRD2Q12894 506 aaPredicted RBP12.59□□□□□ -0.39
USP11-208ENST00000480104 NR5A1Q13285 461 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 KRT32Q14532 448 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 FAM171BQ6P995 826 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 SERPINA13PQ6UXR4 307 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 SPATS2Q86XZ4 545 aaKnown RBP12.59□□□□□ -0.39
USP11-208ENST00000480104 ZNF560Q96MR9 790 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 RUSC1Q9BVN2 902 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 ABCG4Q9H172 646 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 ADNPQ9H2P0 1102 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 CCSER2Q9H7U1 834 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 ERVMER34-1Q9H9K5 563 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 SGK2Q9HBY8 427 aa12.59□□□□□ -0.39
USP11-208ENST00000480104 MAGEC2Q9UBF1 373 aaPredicted RBP12.59□□□□□ -0.39
USP11-208ENST00000480104 ZFC3H1O60293 1989 aaKnown RBP12.59□□□□□ -0.39
USP11-208ENST00000480104 TLR4O00206 839 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 HUS1O60921 280 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
USP11-208ENST00000480104 THEGLP0DJG4 465 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 CKMT1AP12532 417 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 PCSK1P29120 753 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 UQCRFS1P47985 274 aa12.58□□□□□ -0.4
USP11-208ENST00000480104 CD97P48960 835 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms