RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 APOBEC2Q9Y235 224 aaKnown RBP4.32□□□□□ -1.72
COPS7B-220ENST00000479430 MRPS17Q9Y2R5 130 aaKnown RBP4.32□□□□□ -1.72
COPS7B-220ENST00000479430 ASH1LQ9NR48 2969 aaKnown RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 SF3B1O75533 1304 aaKnown RBP eCLIP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 CNTNAP2Q9UHC6 1331 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 FAM149AA5PLN7 773 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 VSTM5A8MXK1 200 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 H3BM21 787 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 MAN2B1O00754 1011 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 LRP3O75074 770 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 RECQL4O94761 1208 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 ALX3O95076 343 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 MT-CO1P00395 513 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 FOSP01100 380 aaPredicted RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 THBDP07204 575 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 NFICP08651 508 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 CYP3A4P08684 503 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 HNRNPA1P09651 372 aaKnown RBP eCLIP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 HNRNPLP14866 589 aaKnown RBP eCLIP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 HOXB4P17483 251 aaPredicted RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 GLRA2P23416 452 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 MCM5P33992 734 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 MAGEA9P43362 315 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 GNAQP50148 359 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 DGKEP52429 567 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 LIMK1P53667 647 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 NUCB1Q02818 461 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 HLTFQ14527 1009 aaKnown RBP eCLIP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 ODF1Q14990 250 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 INF2Q27J81 1249 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 CCDC157Q569K6 752 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 XKR3Q5GH77 459 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 TTC22Q5TAA0 569 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 CREB3L3Q68CJ9 461 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 NCAPH2Q6IBW4 605 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 CDPF1Q6NVV7 123 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 PDZD4Q76G19 769 aaPredicted RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 NIPA1Q7RTP0 329 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 ZNF410Q86VK4 478 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 ARID3BQ8IVW6 561 aaPredicted RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 PPIL6Q8IXY8 311 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 CMIPQ8IY22 773 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 YAF2Q8IY57 180 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 SMAP1Q8IYB5 467 aaPredicted RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 TMEFF1Q8IYR6 380 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 CCDC33Q8N5R6 958 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 RPLP0P6Q8NHW5 317 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 PCDH19Q8TAB3 1148 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 PIGOQ8TEQ8 1089 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 HDAC7Q8WUI4 952 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 SMARCD2Q92925 531 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 IRF7Q92985 503 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 C18orf25Q96B23 403 aaPredicted RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 PSMG3-AS1Q96PY0 264 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 NELL2Q99435 816 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 ARPC5LQ9BPX5 153 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 LZTS2Q9BRK4 669 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 POLR3CQ9BUI4 534 aaPredicted RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 GTPBP2Q9BX10 602 aaKnown RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 ASPNQ9BXN1 380 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 LSG1Q9H089 658 aaKnown RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 POLR3FQ9H1D9 316 aaPredicted RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 EBF3Q9H4W6 596 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 ACSS3Q9H6R3 686 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 EMC7Q9NPA0 242 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 LUC7LQ9NQ29 371 aaKnown RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 H2AFY2Q9P0M6 372 aaPredicted RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 KCNJ14Q9UNX9 436 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 SLC8A2Q9UPR5 921 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 CCL26Q9Y258 94 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 SSX2IPQ9Y2D8 614 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 SF3B6Q9Y3B4 125 aaKnown RBP4.31□□□□□ -1.72
COPS7B-220ENST00000479430 INSL5Q9Y5Q6 135 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 DOPEY2Q9Y3R5 2298 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 CABIN1Q9Y6J0 2220 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 PLXND1Q9Y4D7 1925 aa4.31□□□□□ -1.72
COPS7B-220ENST00000479430 MAST4O15021 2626 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 KIF26BQ2KJY2 2108 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 BCLAF3A2AJT9 711 aaKnown RBP4.3□□□□□ -1.72
COPS7B-220ENST00000479430 LRRIQ4A6NIV6 560 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 EIF4E1BA6NMX2 242 aaKnown RBP4.3□□□□□ -1.72
COPS7B-220ENST00000479430 SGSM2O43147 1006 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 ZBTB43O43298 467 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 USO1O60763 962 aaKnown RBP4.3□□□□□ -1.72
COPS7B-220ENST00000479430 B3GAT3O94766 335 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 SNUPNO95149 360 aaKnown RBP4.3□□□□□ -1.72
COPS7B-220ENST00000479430 PAPLNO95428 1278 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 PRAMEF1O95521 474 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 HARSP12081 509 aaKnown RBP4.3□□□□□ -1.72
COPS7B-220ENST00000479430 RAB6AP20340 208 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 ITPKBP27987 946 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 SMARCA1P28370 1054 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 NMT1P30419 496 aaKnown RBP4.3□□□□□ -1.72
COPS7B-220ENST00000479430 ELF1P32519 619 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 PTGER3P43115 390 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 CTSKP43235 329 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 GPR15P49685 360 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 GALK1P51570 392 aa4.3□□□□□ -1.72
COPS7B-220ENST00000479430 USP11P51784 963 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms