RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 TPGS1Q6ZTW0 290 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 CPXM2Q8N436 756 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 GPT2Q8TD30 523 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 STK32AQ8WU08 396 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 ZNF606Q8WXB4 792 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 HINFPQ9BQA5 517 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 SIX2Q9NPC8 291 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 GMEB2Q9UKD1 530 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 AGO1Q9UL18 857 aaKnown RBP22.76■■□□□ 1.23
COL9A3-211ENST00000477612 DCHS1Q96JQ0 3298 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 PLXND1Q9Y4D7 1925 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 TBC1D3BA6NDS4 549 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 BECN2A8MW95 431 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 NEDD8-MDP1E9PL57 170 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 LRP3O75074 770 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 FBXO21O94952 628 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 PENKP01210 267 aaPredicted RBP22.75■■□□□ 1.23
COL9A3-211ENST00000477612 CISD3P0C7P0 127 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 KRT5P13647 590 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 CORO1AP31146 461 aaKnown RBP22.75■■□□□ 1.23
COL9A3-211ENST00000477612 TIE1P35590 1138 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 MIIPQ5JXC2 388 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 GRAMD4Q6IC98 578 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 GJB7Q6PEY0 223 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 PRR23BQ6ZRT6 265 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 RNF139Q8WU17 664 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 SHC3Q92529 594 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 P2RY11Q96G91 374 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 NDST4Q9H3R1 872 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 STOML2Q9UJZ1 356 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 HCN2Q9UL51 889 aa22.75■■□□□ 1.23
COL9A3-211ENST00000477612 TRIM24O15164 1050 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 MED7O43513 233 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 RPP40O75818 363 aaKnown RBP22.74■■□□□ 1.23
COL9A3-211ENST00000477612 HMBSP08397 361 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 DGKEP52429 567 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 VWA3BQ502W6 1294 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 EOGTQ5NDL2 527 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 FYB2Q5VWT5 728 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 DPY19L2P1Q6NXN4 242 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 TMEM92Q6UXU6 159 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 FMNL3Q8IVF7 1028 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 KIAA2013Q8IYS2 634 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 CCDC33Q8N5R6 958 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 ALLCQ8N6M5 410 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 TXNDC5Q8NBS9 432 aaKnown RBP22.74■■□□□ 1.23
COL9A3-211ENST00000477612 ZC3H10Q96K80 434 aaKnown RBP22.74■■□□□ 1.23
COL9A3-211ENST00000477612 TUBGCP2Q9BSJ2 902 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 SLC4A5Q9BY07 1137 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 DNAJC17Q9NVM6 304 aaKnown RBP22.74■■□□□ 1.23
COL9A3-211ENST00000477612 SDK1Q7Z5N4 2213 aa22.74■■□□□ 1.23
COL9A3-211ENST00000477612 SGK1O00141 431 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 ADAM23O75077 832 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 KLF8O95600 359 aaPredicted RBP22.73■■□□□ 1.23
COL9A3-211ENST00000477612 LATS1O95835 1130 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 LTFP02788 710 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 HNRNPLP14866 589 aaKnown RBP eCLIP22.73■■□□□ 1.23
COL9A3-211ENST00000477612 GNA15P30679 374 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 ACADSBP45954 432 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 APBA1Q02410 837 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 LPAL2Q16609 132 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 CEP68Q76N32 757 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 CACNA2D4Q7Z3S7 1137 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 DENND1CQ8IV53 801 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 FAM160A2Q8N612 972 aaPredicted RBP22.73■■□□□ 1.23
COL9A3-211ENST00000477612 TSTD1Q8NFU3 115 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 ENOX1Q8TC92 643 aaKnown RBP22.73■■□□□ 1.23
COL9A3-211ENST00000477612 EDEM1Q92611 657 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 LOXL4Q96JB6 756 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 SFMBT1Q9UHJ3 866 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 SLC27A6Q9Y2P4 619 aa22.73■■□□□ 1.23
COL9A3-211ENST00000477612 ABCA7Q8IZY2 2146 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 GFRA2O00451 464 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 LETM1O95202 739 aaPredicted RBP22.72■■□□□ 1.23
COL9A3-211ENST00000477612 DGKGP49619 791 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 ARHGAP44Q17R89 818 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 C10orf76Q5T2E6 689 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 DENND1BQ6P3S1 775 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 BEND5Q7L4P6 421 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 TRMT11Q7Z4G4 463 aaKnown RBP22.72■■□□□ 1.23
COL9A3-211ENST00000477612 TMEM110Q86TL2 294 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 ZNF513Q8N8E2 541 aaPredicted RBP22.72■■□□□ 1.23
COL9A3-211ENST00000477612 CLEC4CQ8WTT0 213 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 SAMSN1Q9NSI8 373 aaKnown RBP22.72■■□□□ 1.23
COL9A3-211ENST00000477612 THADAQ6YHU6 1953 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 NUP205Q92621 2012 aa22.72■■□□□ 1.23
COL9A3-211ENST00000477612 PRRT4C9JH25 899 aa22.71■■□□□ 1.23
COL9A3-211ENST00000477612 PIK3R2O00459 728 aa22.71■■□□□ 1.23
COL9A3-211ENST00000477612 SART1O43290 800 aaKnown RBP22.71■■□□□ 1.23
COL9A3-211ENST00000477612 IGLV3-27P01718 113 aa22.71■■□□□ 1.23
COL9A3-211ENST00000477612 FYNP06241 537 aa22.71■■□□□ 1.23
COL9A3-211ENST00000477612 EEF1GP26641 437 aaKnown RBP22.71■■□□□ 1.23
COL9A3-211ENST00000477612 HARS2P49590 506 aaKnown RBP22.71■■□□□ 1.23
COL9A3-211ENST00000477612 KCNMA1Q12791 1236 aa22.71■■□□□ 1.23
COL9A3-211ENST00000477612 TOGARAM2Q6ZUX3 1019 aa22.71■■□□□ 1.23
COL9A3-211ENST00000477612 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.71■■□□□ 1.23
COL9A3-211ENST00000477612 SCUBE3Q8IX30 993 aa22.71■■□□□ 1.23
COL9A3-211ENST00000477612 PARD6AQ9NPB6 346 aa22.71■■□□□ 1.23
COL9A3-211ENST00000477612 ACP6Q9NPH0 428 aa22.71■■□□□ 1.23
COL9A3-211ENST00000477612 PLK2Q9NYY3 685 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms