RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	VPS4A	Q9UN37	437 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	SCAF8	Q9UPN6	1271 aa	Known RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	KAT6A	Q92794	2004 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447		H7C1Q1	480 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	DNPH1	O43598	174 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	PRAMEF2	O60811	474 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	NBN	O60934	754 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	TAF5L	O75529	589 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	NTSR2	O95665	410 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	TMIGD3	P0DMS9	266 aa	Predicted RBP	3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	ALAD	P13716	330 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	SERPINF1	P36955	418 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	GPC5	P78333	572 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	RAE1	P78406	368 aa	Known RBP	3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	CCDC15	Q0P6D6	951 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	SEMA3B	Q13214	749 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	DNASE1L3	Q13609	305 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	KCNJ12	Q14500	433 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	GRM4	Q14833	912 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	BTBD16	Q32M84	506 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	ANO1	Q5XXA6	986 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	FAM90A2P	Q658T7	463 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	FCRLB	Q6BAA4	426 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	LIN54	Q6MZP7	749 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	RINT1	Q6NUQ1	792 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	ERAP2	Q6P179	960 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	DCDC5	Q6ZRR9	648 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	PIK3AP1	Q6ZUJ8	805 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	CACNA2D3	Q8IZS8	1091 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	MYCT1	Q8N699	235 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	FAM71D	Q8N9W8	422 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	EDC3	Q96F86	508 aa	Known RBP	3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	KATNAL1	Q9BW62	490 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	SLITRK6	Q9H5Y7	841 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	ASIC5	Q9NY37	505 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	C11orf21	Q9P2W6	132 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	GRHPR	Q9UBQ7	328 aa		3.85	□□□□□ -1.79
TARDBP-208	ENST00000477447	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	hCG_1642624	A0A1W2PR95	340 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	MANSC4	A6NHS7	340 aa	Predicted RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	UBE2Q2L	H0YL09	131 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	IFRD1	O00458	451 aa	Predicted RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	DHH	O43323	396 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	TPD52L2	O43399	206 aa	Known RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	PROP1	O75360	226 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	RPP40	O75818	363 aa	Known RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	CER1	O95813	267 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	MT-CO3	P00414	261 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	ITGA2B	P08514	1039 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	NHLRC4	P0CG21	123 aa	Predicted RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	GYS1	P13807	737 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	GALNS	P34059	522 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	JAK3	P52333	1124 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	PROK1	P58294	105 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	KCNB1	Q14721	858 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	MFSD13A	Q14CX5	517 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	PDCD2	Q16342	344 aa	Predicted RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	FAM187B	Q17R55	369 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	TRIM71	Q2Q1W2	868 aa	Known RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	CERKL	Q49MI3	558 aa	Predicted RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	AWAT1	Q58HT5	328 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	PRAMEF17	Q5VTA0	474 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	SULT6B1	Q6IMI4	303 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	MSANTD2	Q6P1R3	559 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	TMEM65	Q6PI78	240 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	KLHL17	Q6TDP4	642 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	NRSN1	Q8IZ57	195 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	LINC01465	Q8N7H1	131 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	C12orf76	Q8N812	135 aa	Predicted RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	PNLDC1	Q8NA58	520 aa	Known RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	OR1N1	Q8NGS0	311 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	MORC4	Q8TE76	937 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	SLC22A17	Q8WUG5	538 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	OVCA2	Q8WZ82	227 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	NELL1	Q92832	810 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	RITA1	Q96K30	269 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	MAGEH1	Q9H213	219 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	TP63	Q9H3D4	680 aa	Predicted RBP	3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	PPCS	Q9HAB8	311 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	FBXO28	Q9NVF7	368 aa		3.84	□□□□□ -1.79
TARDBP-208	ENST00000477447	CCDC187	A0A096LP49	1063 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	POC1B-GALNT4	F8VUJ3	575 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447		M0QZQ0	153 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	FYB1	O15117	783 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	CTIF	O43310	598 aa	Known RBP	3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	ACTL6B	O94805	426 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	C1R	P00736	705 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	MBP	P02686	304 aa	Predicted RBP	3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	MMP8	P22894	467 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	THBS4	P35443	961 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	IGHMBP2	P38935	993 aa	Known RBP	3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	CFHR3	Q02985	330 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	CBFB	Q13951	182 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	LARS2	Q15031	903 aa	Known RBP	3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	SMN1	Q16637	294 aa	Known RBP	3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	PROSER3	Q2NL68	480 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	CC2D1B	Q5T0F9	858 aa	Known RBP	3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	ZNF788	Q6ZQV5	615 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	PRIMA1	Q86XR5	153 aa		3.83	□□□□□ -1.8
TARDBP-208	ENST00000477447	GALNT4	Q8N4A0	578 aa		3.83	□□□□□ -1.8

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