RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 BTF3P20290 206 aaKnown RBP4.89□□□□□ -1.63
COL9A1-206ENST00000470652 ACVR2AP27037 513 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 CTGFP29279 349 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 CPT1AP50416 773 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 HLTFQ14527 1009 aaKnown RBP eCLIP4.89□□□□□ -1.63
COL9A1-206ENST00000470652 ZNF750Q32MQ0 723 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 UNC13DQ70J99 1090 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 KRT28Q7Z3Y7 464 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 KCTD20Q7Z5Y7 419 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 SIRT6Q8N6T7 355 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 DNAJB14Q8TBM8 379 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 REPS1Q96D71 796 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 MID2Q9UJV3 735 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 DRG1Q9Y295 367 aaKnown RBP4.89□□□□□ -1.63
COL9A1-206ENST00000470652 SNX13Q9Y5W8 968 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 TTC21BQ7Z4L5 1316 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 NCOA3Q9Y6Q9 1424 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 LRP6O75581 1613 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 MANSC4A6NHS7 340 aaPredicted RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 RAB27BO00194 218 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 FYB1O15117 783 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 CD3EAPO15446 510 aaKnown RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 PIAS2O75928 621 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 VNN1O95497 513 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 MYCLP12524 364 aaPredicted RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 IL1R1P14778 569 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 ZNF37AP17032 561 aaPredicted RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 TPH1P17752 444 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 IL1R2P27930 398 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 UQCRC1P31930 480 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 CARSP49589 748 aaKnown RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 MTHFSP49914 203 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 SUMO2P61956 95 aaKnown RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 RRS1Q15050 365 aaKnown RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 COLEC12Q5KU26 742 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 L1TD1Q5T7N2 865 aaKnown RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 KIAA1614Q5VZ46 1190 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 FCRL6Q6DN72 434 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 MZT2AQ6P582 158 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 GLCCI1Q86VQ1 547 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 SNX22Q96L94 193 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 BRIP1Q9BX63 1249 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 VN1R3Q9BXE9 311 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 INO80BQ9C086 356 aaPredicted RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 GEMIN8Q9NWZ8 242 aaKnown RBP4.88□□□□□ -1.63
COL9A1-206ENST00000470652 DKK4Q9UBT3 224 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 SERGEFQ9UGK8 458 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 USP54Q70EL1 1684 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 OVOS2A0A0J9YW53 1432 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 TNS3Q68CZ2 1445 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 OVOS2Q6IE36 1432 aa4.88□□□□□ -1.63
COL9A1-206ENST00000470652 NFAT5O94916 1531 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 SHPRHQ149N8 1683 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 COL18A1P39060 1754 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 LINC01548A6NM66 108 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 RHPN2P1A8MT19 583 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 M0R3H8 397 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 AP4M1O00189 453 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 PQBP1O60828 265 aaKnown RBP4.87□□□□□ -1.63
COL9A1-206ENST00000470652 PMPCBO75439 489 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 IL18RAPO95256 599 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 MT-ND5P03915 603 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 GKP32189 559 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 GATMP50440 423 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 ITGA8P53708 1063 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 CYP4F2P78329 520 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 E2F1Q01094 437 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 TFF2Q03403 129 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 SLC10A2Q12908 348 aaPredicted RBP4.87□□□□□ -1.63
COL9A1-206ENST00000470652 CYP1B1Q16678 543 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 NAPRTQ6XQN6 538 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 TRIM72Q6ZMU5 477 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 RNF44Q7L0R7 432 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 DAZAP1Q96EP5 407 aaKnown RBP4.87□□□□□ -1.63
COL9A1-206ENST00000470652 CCDC136Q96JN2 1154 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 ZNF668Q96K58 619 aaPredicted RBP4.87□□□□□ -1.63
COL9A1-206ENST00000470652 LENG8Q96PV6 779 aaPredicted RBP4.87□□□□□ -1.63
COL9A1-206ENST00000470652 THAP7Q9BT49 309 aaPredicted RBP4.87□□□□□ -1.63
COL9A1-206ENST00000470652 SARGQ9BW04 601 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 APOL5Q9BWW9 433 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 PNPLA8Q9NP80 782 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 TRIM36Q9NQ86 728 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 TFCP2L1Q9NZI6 479 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 AMFRQ9UKV5 643 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 CAPN11Q9UMQ6 739 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 FRMD4BQ9Y2L6 1034 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 PNPLA6Q8IY17 1366 aa4.87□□□□□ -1.63
COL9A1-206ENST00000470652 EDC4Q6P2E9 1401 aaKnown RBP4.87□□□□□ -1.63
COL9A1-206ENST00000470652 COL22A1Q8NFW1 1626 aaPredicted RBP4.86□□□□□ -1.63
COL9A1-206ENST00000470652 PLCH1Q4KWH8 1693 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 WIPF3A6NGB9 483 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 F8W8V4 182 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 H7C1Q1 480 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 TOM1O60784 492 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 PDE8BO95263 885 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 ANXA2P07355 339 aaKnown RBP4.86□□□□□ -1.63
COL9A1-206ENST00000470652 PGDP52209 483 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 TIRAPP58753 221 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 TUBA4AP68366 448 aa4.86□□□□□ -1.63
COL9A1-206ENST00000470652 TIAL1Q01085 375 aaKnown RBP eCLIP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms