RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 CCDC151A5D8V7 595 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 EFCAB14O75071 495 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 SASH3O75995 380 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 RNF8O76064 485 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 ABLIM3O94929 683 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 LTFP02788 710 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 SOD2P04179 222 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 HAPLN1P10915 354 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 GRIK1P39086 918 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 ELAVL2Q12926 359 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 DPYSL2Q16555 572 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 RASIP1Q5U651 963 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 DUPD1Q68J44 220 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 CCDC137Q6PK04 289 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 ANKS3Q6ZW76 656 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 DDX42Q86XP3 938 aaKnown RBP eCLIP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 KLHL23Q8NBE8 558 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 FBXO22Q8NEZ5 403 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 ADAM32Q8TC27 787 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 SP7Q8TDD2 431 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 EDEM1Q92611 657 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 RUBCNQ92622 972 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 CLP1Q92989 425 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 HERC2P3Q9BVR0 1158 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 NGRNQ9NPE2 291 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 CDY1Q9Y6F8 540 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 LCHNA4D1U4 455 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 LIASO43766 372 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 SEC24AO95486 1093 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 IVDP26440 423 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 CHRNA3P32297 505 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 ROR1Q01973 937 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 GUCY2DQ02846 1103 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 FPGSQ05932 587 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 BRD3Q15059 726 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 OASLQ15646 514 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 USP41Q3LFD5 358 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 BSPRYQ5W0U4 402 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 VSTM1Q6UX27 236 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 BEND5Q7L4P6 421 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 DDX53Q86TM3 631 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 CCDC50Q8IVM0 306 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 GLIS1Q8NBF1 620 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 KCTD15Q96SI1 283 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 EPB41L5Q9HCM4 733 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 NEU3Q9UQ49 428 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 PCDHB5Q9Y5E4 795 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 TNRC18O15417 2968 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-208ENST00000468300 ARHGEF15O94989 841 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FGBP02675 491 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM153BP0C7A2 387 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 PECAM1P16284 738 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-208ENST00000468300 SYN1P17600 705 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FNTAP49354 379 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 SULT1E1P49888 294 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 CBX1P83916 185 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 DR1Q01658 176 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 SEMA3BQ13214 749 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 MTMR3Q13615 1198 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 CCNG2Q16589 344 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 NFE2Q16621 373 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-208ENST00000468300 HADHQ16836 314 aaKnown RBP8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM153CQ494X1 144 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 ERMARDQ5T6L9 678 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 KAZNQ674X7 775 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 DRICH1Q6PGQ1 229 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-208ENST00000468300 BBS12Q6ZW61 710 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 SPRED2Q7Z698 418 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 JAMLQ86YT9 394 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 C7orf61Q8IZ16 206 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 PLD5Q8N7P1 536 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 PCDH19Q8TAB3 1148 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 SLC35B2Q8TB61 432 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 HERVK_113Q902F9 699 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 MAGOHBQ96A72 148 aaKnown RBP8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM149B1Q96BN6 582 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 SPATA17Q96L03 361 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM53CQ9NYF3 392 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 GRHL1Q9NZI5 618 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM153AQ9UHL3 310 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 SCML2Q9UQR0 700 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 ANAPC1Q9H1A4 1944 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM72CH0Y354 149 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 PPIGQ13427 754 aaKnown RBP eCLIP8.59□□□□□ -1.031e-6■■■□□ 19.2
BRCA1-208ENST00000468300 SNX1Q13596 522 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 BTG3Q14201 252 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-208ENST00000468300 LONRF1Q17RB8 773 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 BOLA3Q53S33 107 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM72AQ5TYM5 149 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 SLC9A4Q6AI14 798 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM72DQ6L9T8 149 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 PRUNE1Q86TP1 453 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM72BQ86X60 149 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FAM131BQ86XD5 332 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 VSIG1Q86XK7 387 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 KCTD6Q8NC69 237 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 RIN2Q8WYP3 895 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-208ENST00000468300 ZNF558Q96NG5 402 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 FUT8Q9BYC5 575 aa8.59□□□□□ -1.03
BRCA1-208ENST00000468300 ZDHHC18Q9NUE0 388 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms