RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 SAP25Q8TEE9 199 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 C2orf15Q8WU43 125 aaKnown RBP4.55□□□□□ -1.68
CPS1-205ENST00000467353 CPLX3Q8WVH0 158 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 ZNF516Q92618 1163 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 EXTL1Q92935 676 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 PMEPA1Q969W9 287 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 TRMT2BQ96GJ1 504 aaKnown RBP4.55□□□□□ -1.68
CPS1-205ENST00000467353 VCPIP1Q96JH7 1222 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 CCDC43Q96MW1 224 aaKnown RBP4.55□□□□□ -1.68
CPS1-205ENST00000467353 MTMR9Q96QG7 549 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 SRPK1Q96SB4 655 aaKnown RBP4.55□□□□□ -1.68
CPS1-205ENST00000467353 TCHPQ9BT92 498 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 C22orf23Q9BZE7 217 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 MKRN2Q9H000 416 aaKnown RBP4.55□□□□□ -1.68
CPS1-205ENST00000467353 ZNF768Q9H5H4 540 aaKnown RBP4.55□□□□□ -1.68
CPS1-205ENST00000467353 PIF1Q9H611 641 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 C6orf106Q9H6K1 298 aaPredicted RBP4.55□□□□□ -1.68
CPS1-205ENST00000467353 SRA1Q9HD15 236 aaKnown RBP4.55□□□□□ -1.68
CPS1-205ENST00000467353 TM9SF3Q9HD45 589 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 ASCL3Q9NQ33 180 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 SMPD4Q9NXE4 827 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 CFAP97Q9P2B7 532 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 DEC1Q9P2X7 70 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 NAP1L2Q9ULW6 460 aaPredicted RBP4.55□□□□□ -1.68
CPS1-205ENST00000467353 PCDHB5Q9Y5E4 795 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 CENPEQ02224 2701 aa4.55□□□□□ -1.68
CPS1-205ENST00000467353 CELSR2Q9HCU4 2923 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 CCDC196A0A1B0GTZ2 297 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 A0A1W2PNU3 283 aaPredicted RBP4.54□□□□□ -1.68
CPS1-205ENST00000467353 TTC26A0AVF1 554 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 LACTBL1A8MY62 500 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 PRRT4C9JH25 899 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 SLC9A3R1O14745 358 aaPredicted RBP4.54□□□□□ -1.68
CPS1-205ENST00000467353 CCNT1O60563 726 aaKnown RBP4.54□□□□□ -1.68
CPS1-205ENST00000467353 USP12O75317 370 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 TNFRSF21O75509 655 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 IGLV3-19P01714 112 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ITGB2P05107 769 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 CYP11A1P05108 521 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ITGAVP06756 1048 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 CXCL8P10145 99 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ODC1P11926 461 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 HARSP12081 509 aaKnown RBP4.54□□□□□ -1.68
CPS1-205ENST00000467353 CKMT2P17540 419 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ELAVL4P26378 380 aaKnown RBP4.54□□□□□ -1.68
CPS1-205ENST00000467353 OXTRP30559 389 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 GRIA4P48058 902 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 LSSP48449 732 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ARSDP51689 593 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ERVPABLB-1P60509 514 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 GABREP78334 506 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 SLC7A9P82251 487 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 AKAP17AQ02040 695 aaKnown RBP4.54□□□□□ -1.68
CPS1-205ENST00000467353 CENPCQ03188 943 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 GAD2Q05329 585 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ST3GAL1Q11201 340 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 SMARCB1Q12824 385 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ILKQ13418 452 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 INAVAQ3KP66 663 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 FUT11Q495W5 492 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 WSCD1Q658N2 575 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 MPZL3Q6UWV2 235 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 XKR5Q6UX68 686 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 DHX32Q7L7V1 743 aaKnown RBP4.54□□□□□ -1.68
CPS1-205ENST00000467353 FAM124AQ86V42 546 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 THEM5Q8N1Q8 247 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 TERB1Q8NA31 727 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 SNX19Q92543 992 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 SEMA3CQ99985 751 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ORAI3Q9BRQ5 295 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 NUP58Q9BVL2 599 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 SLC26A6Q9BXS9 759 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 LSG1Q9H089 658 aaKnown RBP4.54□□□□□ -1.68
CPS1-205ENST00000467353 EPN3Q9H201 632 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 POLR1BQ9H9Y6 1135 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 OSGEPQ9NPF4 335 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 SH3GLB2Q9NR46 395 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 PCDHA12Q9UN75 941 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.54□□□□□ -1.68
CPS1-205ENST00000467353 PRKAB1Q9Y478 270 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 CPQQ9Y646 472 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 PTPRDP23468 1912 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 PI4KAP42356 2102 aa4.54□□□□□ -1.68
CPS1-205ENST00000467353 C2CD3Q4AC94 2353 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 POLQO75417 2590 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 PMS2P1A4D2B8 440 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 ZNF840PA6NDX5 716 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 CCDC169A6NNP5 214 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 GFRA2O00451 464 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 LAD1O00515 517 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 PIRO00625 290 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 CYB561D2O14569 222 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 HOXC11O43248 304 aaPredicted RBP4.53□□□□□ -1.68
CPS1-205ENST00000467353 DFNA5O60443 496 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 TSPAN3O60637 253 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 DNAJC6O75061 913 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 IGHDP01880 384 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 CPA1P15085 419 aa4.53□□□□□ -1.68
CPS1-205ENST00000467353 GCFC2P16383 781 aaKnown RBP4.53□□□□□ -1.68
CPS1-205ENST00000467353 CYP3A5P20815 502 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms