RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 FBXO21O94952 628 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 KLKB1P03952 638 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 CHKAP35790 457 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 CT47A1Q5JQC4 288 aaPredicted RBP16.96■□□□□ 0.31
CPSF6-203ENST00000456847 DENND1BQ6P3S1 775 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 PHTF2Q8N3S3 785 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 TXNDC5Q8NBS9 432 aaKnown RBP16.96■□□□□ 0.31
CPSF6-203ENST00000456847 GAB3Q8WWW8 586 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 PLK2Q9NYY3 685 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 MYO15AQ9UKN7 3530 aa16.96■□□□□ 0.31
CPSF6-203ENST00000456847 LTFP02788 710 aa16.96■□□□□ 0.3
CPSF6-203ENST00000456847 CYBBP04839 570 aa16.96■□□□□ 0.3
CPSF6-203ENST00000456847 DGKEP52429 567 aa16.96■□□□□ 0.3
CPSF6-203ENST00000456847 EOGTQ5NDL2 527 aa16.96■□□□□ 0.3
CPSF6-203ENST00000456847 EMC10Q5UCC4 262 aa16.96■□□□□ 0.3
CPSF6-203ENST00000456847 CLEC4CQ8WTT0 213 aa16.96■□□□□ 0.3
CPSF6-203ENST00000456847 ZDHHC4Q9NPG8 344 aa16.96■□□□□ 0.3
CPSF6-203ENST00000456847 SAMSN1Q9NSI8 373 aaKnown RBP16.96■□□□□ 0.3
CPSF6-203ENST00000456847 AGO1Q9UL18 857 aaKnown RBP16.96■□□□□ 0.3
CPSF6-203ENST00000456847 HBS1LQ9Y450 684 aaKnown RBP16.96■□□□□ 0.3
CPSF6-203ENST00000456847 NFE2L3Q9Y4A8 694 aa16.96■□□□□ 0.3
CPSF6-203ENST00000456847 TRIM24O15164 1050 aa16.95■□□□□ 0.3
CPSF6-203ENST00000456847 ACADSBP45954 432 aa16.95■□□□□ 0.3
CPSF6-203ENST00000456847 HARS2P49590 506 aaKnown RBP16.95■□□□□ 0.3
CPSF6-203ENST00000456847 DGKGP49619 791 aa16.95■□□□□ 0.3
CPSF6-203ENST00000456847 HSF5Q4G112 596 aaPredicted RBP16.95■□□□□ 0.3
CPSF6-203ENST00000456847 SASS6Q6UVJ0 657 aa16.95■□□□□ 0.3
CPSF6-203ENST00000456847 TRMT11Q7Z4G4 463 aaKnown RBP16.95■□□□□ 0.3
CPSF6-203ENST00000456847 ZNF513Q8N8E2 541 aaPredicted RBP16.95■□□□□ 0.3
CPSF6-203ENST00000456847 ZNF606Q8WXB4 792 aa16.95■□□□□ 0.3
CPSF6-203ENST00000456847 ACP6Q9NPH0 428 aa16.95■□□□□ 0.3
CPSF6-203ENST00000456847 DNAJC12Q9UKB3 198 aa16.95■□□□□ 0.3
CPSF6-203ENST00000456847 USP18Q9UMW8 372 aa16.95■□□□□ 0.3
CPSF6-203ENST00000456847 USP34Q70CQ2 3546 aa16.95■□□□□ 0.3
CPSF6-203ENST00000456847 BECN2A8MW95 431 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 SART1O43290 800 aaKnown RBP16.94■□□□□ 0.3
CPSF6-203ENST00000456847 MSI1O43347 362 aaKnown RBP16.94■□□□□ 0.3
CPSF6-203ENST00000456847 GABBR2O75899 941 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 MBD3O95983 291 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 GPD2P43304 727 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 MIIPQ5JXC2 388 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 ANO7Q6IWH7 933 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 IL17RCQ8NAC3 791 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 SHC3Q92529 594 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 FAM149B1Q96BN6 582 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 SIX2Q9NPC8 291 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 VPS13AQ96RL7 3174 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 RIF1Q5UIP0 2472 aaKnown RBP16.94■□□□□ 0.3
CPSF6-203ENST00000456847 A0A0A0MRY4 1105 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 SGK1O00141 431 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 ALDH1A2O94788 518 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 TPM2P07951 284 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 EEF1GP26641 437 aaKnown RBP16.94■□□□□ 0.3
CPSF6-203ENST00000456847 KIR2DL1P43626 348 aaPredicted RBP16.94■□□□□ 0.3
CPSF6-203ENST00000456847 TRIP4Q15650 581 aaPredicted RBP16.94■□□□□ 0.3
CPSF6-203ENST00000456847 CRY1Q16526 586 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 MEA1Q16626 185 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 TCP11X2Q5H9J9 407 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 MSANTD2Q6P1R3 559 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 TPSD1Q9BZJ3 242 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 POLMQ9NP87 494 aaPredicted RBP16.94■□□□□ 0.3
CPSF6-203ENST00000456847 TAB2Q9NYJ8 693 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 AJAP1Q9UKB5 411 aaPredicted RBP16.94■□□□□ 0.3
CPSF6-203ENST00000456847 RALGAPA1Q6GYQ0 2036 aa16.94■□□□□ 0.3
CPSF6-203ENST00000456847 PTPRZ1P23471 2315 aaPredicted RBP16.93■□□□□ 0.3
CPSF6-203ENST00000456847 PTK2Q05397 1052 aa16.93■□□□□ 0.3
CPSF6-203ENST00000456847 RAPGEF1Q13905 1077 aa16.93■□□□□ 0.3
CPSF6-203ENST00000456847 RBM43Q6ZSC3 357 aaKnown RBP16.93■□□□□ 0.3
CPSF6-203ENST00000456847 TOGARAM2Q6ZUX3 1019 aa16.93■□□□□ 0.3
CPSF6-203ENST00000456847 CACNA2D4Q7Z3S7 1137 aa16.93■□□□□ 0.3
CPSF6-203ENST00000456847 CPXM2Q8N436 756 aa16.93■□□□□ 0.3
CPSF6-203ENST00000456847 FAM160A2Q8N612 972 aaPredicted RBP16.93■□□□□ 0.3
CPSF6-203ENST00000456847 GPR161Q8N6U8 529 aaKnown RBP16.93■□□□□ 0.3
CPSF6-203ENST00000456847 ENOX1Q8TC92 643 aaKnown RBP16.93■□□□□ 0.3
CPSF6-203ENST00000456847 DDI1Q8WTU0 396 aa16.93■□□□□ 0.3
CPSF6-203ENST00000456847 ANO10Q9NW15 660 aa16.93■□□□□ 0.3
CPSF6-203ENST00000456847 BCCIPQ9P287 314 aaKnown RBP eCLIP16.93■□□□□ 0.3
CPSF6-203ENST00000456847 EBF1Q9UH73 591 aa16.93■□□□□ 0.3
CPSF6-203ENST00000456847 SPAG17Q6Q759 2223 aa16.93■□□□□ 0.3
CPSF6-203ENST00000456847 RETP07949 1114 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 NCAM1P13591 858 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 STX1AQ16623 288 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 TMEM92Q6UXU6 159 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 PASD1Q8IV76 773 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 SCUBE3Q8IX30 993 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 LSM14BQ9BX40 385 aaKnown RBP16.92■□□□□ 0.3
CPSF6-203ENST00000456847 OTOGLQ3ZCN5 2332 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 MYO18AQ92614 2054 aaKnown RBP16.92■□□□□ 0.3
CPSF6-203ENST00000456847 E5RJQ4 531 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 CAPN9O14815 690 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 PENKP01210 267 aaPredicted RBP16.92■□□□□ 0.3
CPSF6-203ENST00000456847 PNMA6AP0CW24 399 aaPredicted RBP16.92■□□□□ 0.3
CPSF6-203ENST00000456847 WASP42768 502 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 SPEM2Q0P670 501 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 CCDC183Q5T5S1 534 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 FYB2Q5VWT5 728 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 EGFLAMQ63HQ2 1017 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 SDE2Q6IQ49 451 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 KBTBD6Q86V97 674 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 KCNV2Q8TDN2 545 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms