RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SCAPQ12770 1279 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 CALCOCO2Q13137 446 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 BTG3Q14201 252 aaPredicted RBP14.81□□□□□ -0.04
USP39-207ENST00000450066 FAM117BQ6P1L5 589 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 PRSS55Q6UWB4 352 aaPredicted RBP14.81□□□□□ -0.04
USP39-207ENST00000450066 RNF19BQ6ZMZ0 732 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 FBXO25Q8TCJ0 367 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 PIK3R5Q8WYR1 880 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 SNF8Q96H20 258 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 FAM204AQ9H8W3 233 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 PRDM16Q9HAZ2 1276 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 IL37Q9NZH6 218 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 FBXW11Q9UKB1 542 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 CDY1Q9Y6F8 540 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 APOL1O14791 398 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 VNN2O95498 520 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 KRT14P02533 472 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 ATF2P15336 505 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 ZFXP17010 805 aaPredicted RBP14.81□□□□□ -0.04
USP39-207ENST00000450066 LAG3P18627 525 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 ADRA1BP35368 520 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 ADCY8P40145 1251 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 CXCR3P49682 368 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 NOMO1Q15155 1222 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 EFHC2Q5JST6 749 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 MON1AQ86VX9 555 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 SLC39A11Q8N1S5 342 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 FBXO22Q8NEZ5 403 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 RIN2Q8WYP3 895 aaPredicted RBP14.81□□□□□ -0.04
USP39-207ENST00000450066 LRRC45Q96CN5 670 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 SPATA17Q96L03 361 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 CSPG4P5Q96PW8 444 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 TMEM121Q9BTD3 319 aa14.81□□□□□ -0.04
USP39-207ENST00000450066 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.81□□□□□ -0.04
USP39-207ENST00000450066 CWC15Q9P013 229 aaKnown RBP14.81□□□□□ -0.04
USP39-207ENST00000450066 MCF2LO15068 1137 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 IGLV3-25P01717 112 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 SOD2P04179 222 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 HAPLN1P10915 354 aaPredicted RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 ARL4AP40617 200 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 GPR15P49685 360 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 EIF3EP60228 445 aaKnown RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 IFRD2Q12894 506 aaPredicted RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 TRIP13Q15645 432 aaPredicted RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 PSMD5Q16401 504 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 ARL13BQ3SXY8 428 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 BTBD8Q5XKL5 378 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 KIAA1841Q6NSI8 718 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 SCD5Q86SK9 330 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 PYROXD2Q8N2H3 581 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 TTC9BQ8N6N2 239 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 TSEN2Q8NCE0 465 aaKnown RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 DQX1Q8TE96 717 aaKnown RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 TMEM169Q96HH4 297 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 MAGEB5Q9BZ81 275 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 MRPL42Q9Y6G3 142 aaKnown RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 FAM92AA1XBS5 289 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 SGK1O00141 431 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 TP73O15350 636 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 EN2P19622 333 aaPredicted RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 CAV1Q03135 178 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 GPS2Q13227 327 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 EIF4EBP2Q13542 120 aaPredicted RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 SDHAF4Q5VUM1 108 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 DENND5BQ6ZUT9 1274 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 C16orf59Q7L2K0 433 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 OTOP2Q7RTS6 562 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 TMC3Q7Z5M5 1100 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 TAC4Q86UU9 113 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 ARHGAP18Q8N392 663 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 BBOF1Q8ND07 529 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 MTRF1LQ9UGC7 380 aaKnown RBP14.8□□□□□ -0.04
USP39-207ENST00000450066 SLC27A5Q9Y2P5 690 aa14.8□□□□□ -0.04
USP39-207ENST00000450066 LAMA2P24043 3122 aaKnown RBP14.79□□□□□ -0.04
USP39-207ENST00000450066 RTN3O95197 1032 aaPredicted RBP14.79□□□□□ -0.04
USP39-207ENST00000450066 RBP3P10745 1247 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 GOT1P17174 413 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 RPL10AP62906 217 aaKnown RBP14.79□□□□□ -0.04
USP39-207ENST00000450066 ROR1Q01973 937 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 PPIGQ13427 754 aaKnown RBP eCLIP14.79□□□□□ -0.044e-7■■□□□ 13.9
USP39-207ENST00000450066 MGAT5BQ3V5L5 792 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 ALS2CLQ60I27 953 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 C1orf228Q6PIY5 440 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 NPNTQ6UXI9 565 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 KRT222Q8N1A0 295 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 COLGALT1Q8NBJ5 622 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 RNF139Q8WU17 664 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 YME1L1Q96TA2 773 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 SEPT5Q99719 369 aaPredicted RBP14.79□□□□□ -0.04
USP39-207ENST00000450066 MCOLN1Q9GZU1 580 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 CRISPLD1Q9H336 500 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 SMOC2Q9H3U7 446 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 WDCPQ9H6R7 721 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 NMUR1Q9HB89 426 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 PCDH9Q9HC56 1237 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 TMPRSS4Q9NRS4 437 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 TMEM51Q9NW97 253 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 COMMD8Q9NX08 183 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 SPG21Q9NZD8 308 aa14.79□□□□□ -0.04
USP39-207ENST00000450066 PRKAG2Q9UGJ0 569 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms