RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PURAQ00577 322 aaKnown RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF177Q13360 481 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 XRCC4Q13426 336 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 RIPOR1Q6ZS17 1223 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 SVOPQ8N4V2 548 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CCDC33Q8N5R6 958 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 POU5F2Q8N7G0 328 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 C19orf18Q8NEA5 215 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 VCPIP1Q96JH7 1222 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 TBCBQ99426 244 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 POP1Q99575 1024 aaKnown RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 NDEL1Q9GZM8 345 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 RERGLQ9H628 205 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 KLHL3Q9UH77 587 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ADAM30Q9UKF2 790 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 VANGL2Q9ULK5 521 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 FAM205AQ6ZU69 1335 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 A0A087WXM4 84 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 INPP4BO15327 924 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 MT-CO1P00395 513 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 IRF1P10914 325 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 EPB42P16452 691 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 SLC11A2P49281 568 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 SERPINH1P50454 418 aaKnown RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 ALDH6A1Q02252 535 aaKnown RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 PDIA6Q15084 440 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 NR6A1Q15406 480 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 GLRA4Q5JXX5 417 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 OTUD3Q5T2D3 398 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 SLC44A2Q8IWA5 706 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-204ENST00000448183 MIER2Q8N344 545 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CENPTQ96BT3 561 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 C19orf60Q96EN9 201 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 SEPHS2Q99611 448 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 PRRG3Q9BZD7 231 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CLPBQ9H078 707 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 RGS18Q9NS28 235 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 TMEM51Q9NW97 253 aa7.99□□□□□ -1.13
NEDD9-204ENST00000448183 CEP152O94986 1710 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 KBTBD13C9JR72 458 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 H0YC42 278 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 DDX3XO00571 662 aaKnown RBP eCLIP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 MRASO14807 208 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 PEX1O43933 1283 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ARP10275 920 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 SKIV2L2P42285 1042 aaKnown RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CD151P48509 253 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 Q4G0T1 1027 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 SLC45A4Q5BKX6 768 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 KHDRBS2Q5VWX1 349 aaKnown RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CYP4Z1Q86W10 505 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 WDR49Q8IV35 697 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 MICALL2Q8IY33 904 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 TATDN2Q93075 761 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 FICDQ9BVA6 458 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 RNPEPQ9H4A4 650 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 NMRK2Q9NPI5 230 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CYLDQ9NQC7 956 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 KCND1Q9NSA2 647 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 INTS13Q9NVM9 706 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CYP39A1Q9NYL5 469 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ARMCX1Q9P291 453 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 RABGEF1Q9UJ41 708 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 PTPRUQ92729 1446 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ASNA1O43681 348 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 SNX3O60493 162 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 PLA2G6O60733 806 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 FBXO21O94952 628 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 GLP2RO95838 553 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ODC1P11926 461 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CYP2F1P24903 491 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 GPC1P35052 558 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 C21orf59P57076 290 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 MYL6P60660 151 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 PKN1Q16512 942 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CCDC149Q6ZUS6 474 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 FBXL16Q8N461 479 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 DHRSXQ8N5I4 330 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 RORBQ92753 470 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ZKSCAN4Q969J2 545 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 TMEM176AQ96HP8 235 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 DUSP9Q99956 384 aaKnown RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 EHD4Q9H223 541 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 GGA3Q9NZ52 723 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 GGA2Q9UJY4 613 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 NDUFAF1Q9Y375 327 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 PNMA8CA0A1B0GUJ8 204 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 MGAT4DA6NG13 374 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 PSMG1O95456 288 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CRTAMO95727 393 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ITGALP20701 1170 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ADRA1DP25100 572 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CHI3L1P36222 383 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 OR1G1P47890 313 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 EIF2B2P49770 351 aaKnown RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CDK7P50613 346 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 DCTN2Q13561 401 aaKnown RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 FASTKQ14296 549 aaKnown RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 NEDD8Q15843 81 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 AMHR2Q16671 573 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms