RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ALDH1A2O94788 518 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 A1BGP04217 495 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 DARSP14868 501 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 RBP5P82980 135 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 AKIRIN2Q53H80 203 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 SLC45A4Q5BKX6 768 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 GRTP1Q5TC63 336 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 SAMD3Q8N6K7 520 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF669Q96BR6 464 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 TMEM8AQ9HCN3 771 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 ARHGAP28Q9P2N2 729 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 LSM7Q9UK45 103 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 KCNH4Q9UQ05 1017 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 ALG6Q9Y672 507 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 SUPT7LO94864 414 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 SLC2A3P11169 496 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 LCP1P13796 627 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 CCNG1P51959 295 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 CDC42P60953 191 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 PDK3Q15120 406 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 ALX1Q15699 326 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 TCEAL5Q5H9L2 206 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 SNRNP48Q6IEG0 339 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 KYAT3Q6YP21 454 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 EHD1Q9H4M9 534 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 TMEM138Q9NPI0 162 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 TRAPPC3O43617 180 aa11.83□□□□□ -0.51
PTCH1-209ENST00000437951 GRK4P32298 578 aa11.83□□□□□ -0.51
PTCH1-209ENST00000437951 CDK16Q00536 496 aa11.83□□□□□ -0.51
PTCH1-209ENST00000437951 DPYSQ14117 519 aa11.83□□□□□ -0.51
PTCH1-209ENST00000437951 RTKN2Q8IZC4 609 aa11.83□□□□□ -0.51
PTCH1-209ENST00000437951 SLC7A14Q8TBB6 771 aa11.83□□□□□ -0.51
PTCH1-209ENST00000437951 SLC20A1Q8WUM9 679 aa11.83□□□□□ -0.51
PTCH1-209ENST00000437951 C18orf25Q96B23 403 aaPredicted RBP11.83□□□□□ -0.51
PTCH1-209ENST00000437951 SPON2Q9BUD6 331 aa11.83□□□□□ -0.51
PTCH1-209ENST00000437951 SFI1A8K8P3 1242 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 TNFRSF8P28908 595 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 NOS3P29474 1203 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 SHC4Q6S5L8 630 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ADCK2Q7Z695 626 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 STRA8Q7Z7C7 330 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 PSMA8Q8TAA3 256 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 PNKPQ96T60 521 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 MROH7-TTC4A0A0A0MT08 1334 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ZNF879B4DU55 563 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 YWHAQP27348 245 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 CRABP2P29373 138 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 MAGEA2P43356 314 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ALDH1A3P47895 512 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 UBXN2AP68543 259 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 OVGP1Q12889 678 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 PWP1Q13610 501 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ALFQ53S48 1182 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 CWF19L1Q69YN2 538 aaKnown RBP11.83□□□□□ -0.52
PTCH1-209ENST00000437951 CXXC5Q7LFL8 322 aaKnown RBP11.83□□□□□ -0.52
PTCH1-209ENST00000437951 APOPT1Q96IL0 206 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 GTF2A1LQ9UNN4 478 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 KPNA6O60684 536 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 GYPCP04921 128 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ADORA2BP29275 332 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ADSLP30566 484 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-209ENST00000437951 CDK8P49336 464 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 SWI5Q1ZZU3 235 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 PM20D2Q8IYS1 436 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 BLOC1S5Q8TDH9 187 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ROGDIQ9GZN7 287 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 TUBE1Q9UJT0 475 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 RPS6KA6Q9UK32 745 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ATP7AQ04656 1500 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 KIF28PB7ZC32 967 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 CPA3P15088 417 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 COPZ1P61923 177 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 MCL1Q07820 350 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 NFX1Q12986 1120 aaKnown RBP11.83□□□□□ -0.52
PTCH1-209ENST00000437951 MTA1Q13330 715 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 PGS1Q32NB8 556 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 NLGN1Q8N2Q7 840 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ITFG1Q8TB96 612 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 REPS1Q96D71 796 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ZHX1-C8orf76Q96EF9 292 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 AGAP3Q96P47 875 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 PAFAH2Q99487 392 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 EIF2AK1Q9BQI3 630 aaKnown RBP11.83□□□□□ -0.52
PTCH1-209ENST00000437951 LXNQ9BS40 222 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 RERGLQ9H628 205 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 LY9Q9HBG7 655 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 C3orf18Q9UK00 162 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-209ENST00000437951 EIF2AK2P19525 551 aaKnown RBP11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ADORA1P30542 326 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 SRP54P61011 504 aaKnown RBP11.83□□□□□ -0.52
PTCH1-209ENST00000437951 GNA13Q14344 377 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 ERICH5Q6P6B1 374 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 TMEM106CQ9BVX2 250 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 TRIM9Q9C026 710 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 SIK2Q9H0K1 926 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 OR14I1A6ND48 311 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms