RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 C7orf72A4D263 438 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 FBXO21O94952 628 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 NAT1P18440 290 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 CSE1LP55060 971 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 SLC18A2Q05940 514 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 RC3H1Q5TC82 1133 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 SPOCD1Q6ZMY3 1216 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 RMND5BQ96G75 393 aaPredicted RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 LENG8Q96PV6 779 aaPredicted RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 KIFC3Q9BVG8 833 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 NAA50Q9GZZ1 169 aaKnown RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 COQ10BQ9H8M1 238 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 PCDH9Q9HC56 1237 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 C6orf203Q9P0P8 240 aaPredicted RBP7.7□□□□□ -1.18
CPSF6-202ENST00000435070 STK24Q9Y6E0 443 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 SNCAIPQ9Y6H5 919 aa7.7□□□□□ -1.18
CPSF6-202ENST00000435070 DOCK2Q92608 1830 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 GLI3P10071 1580 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TMEM150BA6NC51 233 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 MS4A2Q01362 244 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 CTBSQ01459 385 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TRAF2Q12933 501 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TRIM16LQ309B1 348 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SMUG1Q53HV7 270 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 KATNAL2Q8IYT4 538 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 FAM47BQ8NA70 645 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 CXorf38Q8TB03 319 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 ATP6V0A1Q93050 837 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 PPWD1Q96BP3 646 aaKnown RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 ISOC1Q96CN7 298 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 RNPEPQ9H4A4 650 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SIAEQ9HAT2 523 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 WRAP73Q9P2S5 460 aaPredicted RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 CROTQ9UKG9 612 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 PLCH1Q4KWH8 1693 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 hCG_1984214I3L0E3 225 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 COX4I1P13073 169 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 NME3Q13232 169 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 CHST15Q7LFX5 561 aaPredicted RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SNX29P2Q8IUI4 249 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 LZTR1Q8N653 840 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF713Q8N859 430 aaPredicted RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 BORCS5Q969J3 196 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TMA16Q96EY4 203 aaKnown RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 NRDE2Q9H7Z3 1164 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 PPCSQ9HAB8 311 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 MYRFQ9Y2G1 1151 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SLC16A4O15374 487 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 AMHP03971 560 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 S100BP04271 92 aaPredicted RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 ADRA2BP18089 450 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TCEA1P23193 301 aaKnown RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 ATP6V1E2Q96A05 226 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TPK1Q9H3S4 243 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 ATF5Q9Y2D1 282 aaPredicted RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 CORINQ9Y5Q5 1042 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 PSTPIP1O43586 416 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 H6PDO95479 791 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 BPGMP07738 259 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SLC1A6P48664 564 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 MAMLD1Q13495 774 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SLC26A11Q86WA9 606 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SNX32Q86XE0 403 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SIX5Q8N196 739 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 CIB1Q99828 191 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 DHRS4Q9BTZ2 278 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 THAP1Q9NVV9 213 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 GPRC5DQ9NZD1 345 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SLC17A6Q9P2U8 582 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 PCSK1NQ9UHG2 260 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 RNASEH2AO75792 299 aaKnown RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 CKMT2P17540 419 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 BMXP51813 675 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 RPS6P62753 249 aaKnown RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TBCCQ15814 346 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SHROOM1Q2M3G4 852 aaPredicted RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF394Q53GI3 561 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TTC39BQ5VTQ0 682 aaPredicted RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TMEM26Q6ZUK4 368 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TMCO5AQ8N6Q1 288 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 Q8N9G6 341 aaPredicted RBP7.69□□□□□ -1.18
CPSF6-202ENST00000435070 LENG9Q96B70 501 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 MARK4Q96L34 752 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 MCEEQ96PE7 176 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 RANBP9Q96S59 729 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 TSPAN18Q96SJ8 248 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 SNX13Q9Y5W8 968 aa7.69□□□□□ -1.18
CPSF6-202ENST00000435070 A0A0B4J269 797 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 MEIS2O14770 477 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ZBTB14O43829 449 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 CNOT3O75175 753 aaKnown RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF182P17025 639 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 NKX1-1Q15270 411 aaPredicted RBP7.68□□□□□ -1.18
CPSF6-202ENST00000435070 KRT39Q6A163 491 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 SLC9A4Q6AI14 798 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 KCNT2Q6UVM3 1135 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 WNK4Q96J92 1243 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ZFYVE28Q9HCC9 887 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 ATAD3AQ9NVI7 634 aa7.68□□□□□ -1.18
CPSF6-202ENST00000435070 PLK2Q9NYY3 685 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms