RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 EOGTQ5NDL2 527 aa23.83■■□□□ 1.4
HOMER3-203ENST00000433218 RNF43Q68DV7 783 aa23.83■■□□□ 1.4
HOMER3-203ENST00000433218 IL31Q6EBC2 164 aa23.83■■□□□ 1.4
HOMER3-203ENST00000433218 GRAMD4Q6IC98 578 aa23.83■■□□□ 1.4
HOMER3-203ENST00000433218 CYP2U1Q7Z449 544 aa23.83■■□□□ 1.4
HOMER3-203ENST00000433218 PIGZQ86VD9 579 aa23.83■■□□□ 1.4
HOMER3-203ENST00000433218 CCDC26Q8TAB7 109 aa23.83■■□□□ 1.4
HOMER3-203ENST00000433218 FSCN3Q9NQT6 498 aa23.83■■□□□ 1.4
HOMER3-203ENST00000433218 MARK1Q9P0L2 795 aa23.83■■□□□ 1.4
HOMER3-203ENST00000433218 CETN3O15182 167 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 CALCAP01258 141 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 HOXB2P14652 356 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 EFEMP1Q12805 493 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 GOLGA7BQ2TAP0 167 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 TMEM176AQ96HP8 235 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 TSG101Q99816 390 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 TMEM74BQ9NUR3 256 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 TMEM63CQ9P1W3 806 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 CALCOCO1Q9P1Z2 691 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 DNMT3LQ9UJW3 386 aa23.82■■□□□ 1.4
HOMER3-203ENST00000433218 LRMPQ12912 555 aa23.81■■□□□ 1.4
HOMER3-203ENST00000433218 NFKBIBQ15653 356 aa23.81■■□□□ 1.4
HOMER3-203ENST00000433218 RAB41Q5JT25 222 aa23.81■■□□□ 1.4
HOMER3-203ENST00000433218 KLHL10Q6JEL2 608 aa23.81■■□□□ 1.4
HOMER3-203ENST00000433218 DEFB119Q8N690 84 aa23.81■■□□□ 1.4
HOMER3-203ENST00000433218 UBR7Q8N806 425 aa23.81■■□□□ 1.4
HOMER3-203ENST00000433218 CCDC150Q8NCX0 1101 aa23.81■■□□□ 1.4
HOMER3-203ENST00000433218 SLC35C1Q96A29 364 aa23.81■■□□□ 1.4
HOMER3-203ENST00000433218 POLMQ9NP87 494 aaPredicted RBP23.81■■□□□ 1.4
HOMER3-203ENST00000433218 LSM7Q9UK45 103 aaKnown RBP23.81■■□□□ 1.4
HOMER3-203ENST00000433218 IGF2RP11717 2491 aa23.81■■□□□ 1.4
HOMER3-203ENST00000433218 C4orf47A7E2U8 309 aa23.8■■□□□ 1.4
HOMER3-203ENST00000433218 GIPC1O14908 333 aa23.8■■□□□ 1.4
HOMER3-203ENST00000433218 CISD3P0C7P0 127 aa23.8■■□□□ 1.4
HOMER3-203ENST00000433218 BMP6P22004 513 aa23.8■■□□□ 1.4
HOMER3-203ENST00000433218 HSF5Q4G112 596 aaPredicted RBP23.8■■□□□ 1.4
HOMER3-203ENST00000433218 N4BP2L1Q5TBK1 243 aaPredicted RBP23.8■■□□□ 1.4
HOMER3-203ENST00000433218 KLHDC10Q6PID8 442 aa23.8■■□□□ 1.4
HOMER3-203ENST00000433218 PIGKQ92643 395 aa23.8■■□□□ 1.4
HOMER3-203ENST00000433218 CACNA2D2Q9NY47 1150 aa23.8■■□□□ 1.4
HOMER3-203ENST00000433218 TSPAN16Q9UKR8 245 aa23.8■■□□□ 1.4
HOMER3-203ENST00000433218 CLEC4EQ9ULY5 219 aa23.8■■□□□ 1.4
HOMER3-203ENST00000433218 WASH3PC4AMC7 463 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 SLC16A3O15427 465 aaKnown RBP23.79■■□□□ 1.4
HOMER3-203ENST00000433218 FOXD2O60548 495 aaPredicted RBP23.79■■□□□ 1.4
HOMER3-203ENST00000433218 ALDH1A2O94788 518 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 NDUFV2P19404 249 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 CORO1AP31146 461 aaKnown RBP23.79■■□□□ 1.4
HOMER3-203ENST00000433218 CUL2Q13617 745 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 ARHGAP17Q68EM7 881 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 SASS6Q6UVJ0 657 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 RBM43Q6ZSC3 357 aaKnown RBP23.79■■□□□ 1.4
HOMER3-203ENST00000433218 PGBD3Q8N328 593 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 KAT5Q92993 513 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 DHTKD1Q96HY7 919 aaPredicted RBP23.79■■□□□ 1.4
HOMER3-203ENST00000433218 ULBP1Q9BZM6 244 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 CTNND2Q9UQB3 1225 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 COQ4Q9Y3A0 265 aa23.79■■□□□ 1.4
HOMER3-203ENST00000433218 TMEM131Q92545 1883 aa23.78■■□□□ 1.4
HOMER3-203ENST00000433218 PCNX2A6NKB5 2137 aa23.78■■□□□ 1.4
HOMER3-203ENST00000433218 IRX4P78413 519 aa23.78■■□□□ 1.4
HOMER3-203ENST00000433218 PDE4CQ08493 712 aa23.78■■□□□ 1.4
HOMER3-203ENST00000433218 FYB2Q5VWT5 728 aa23.78■■□□□ 1.4
HOMER3-203ENST00000433218 DACH1Q9UI36 760 aa23.78■■□□□ 1.4
HOMER3-203ENST00000433218 PPP1R3GB7ZBB8 358 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 CDX4O14627 284 aaPredicted RBP23.77■■□□□ 1.4
HOMER3-203ENST00000433218 TRIM21P19474 475 aaKnown RBP23.77■■□□□ 1.4
HOMER3-203ENST00000433218 NTSR1P30989 418 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 PLA2G4AP47712 749 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 DGKGP49619 791 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 TKTL1P51854 596 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 YWHAGP61981 247 aaKnown RBP eCLIP23.77■■□□□ 1.4
HOMER3-203ENST00000433218 GOLGA8FQ08AF8 430 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 GOLGA8DPQ0D2H9 430 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 ADIGQ0VDE8 80 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 GEN1Q17RS7 908 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 PSAPL1Q6NUJ1 521 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 MLKLQ8NB16 471 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 NELFBQ8WX92 580 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 SPACA7Q96KW9 195 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 ZSWIM1Q9BR11 485 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 LSM14BQ9BX40 385 aaKnown RBP23.77■■□□□ 1.4
HOMER3-203ENST00000433218 CLIC5Q9NZA1 410 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 AGO1Q9UL18 857 aaKnown RBP23.77■■□□□ 1.4
HOMER3-203ENST00000433218 STARD13Q9Y3M8 1113 aa23.77■■□□□ 1.4
HOMER3-203ENST00000433218 FREM2Q5SZK8 3169 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 BICDL2A1A5D9 508 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 GABBR2O75899 941 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 KCNK5O95279 499 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 ITPKAP23677 461 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 LRRC63Q05C16 580 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 PAK1Q13153 545 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 DENND1CQ8IV53 801 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 CHPFQ8IZ52 775 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 ANKRD52Q8NB46 1076 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 UBA3Q8TBC4 463 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 IPO4Q8TEX9 1081 aaKnown RBP23.76■■□□□ 1.39
HOMER3-203ENST00000433218 TFAP2BQ92481 460 aa23.76■■□□□ 1.39
HOMER3-203ENST00000433218 XPO6Q96QU8 1125 aaKnown RBP23.76■■□□□ 1.39
HOMER3-203ENST00000433218 PIK3R2O00459 728 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms