RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CCNG1P51959 295 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 HERVK_113P62684 666 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 DMTNQ08495 405 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 C1DQ13901 141 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 SEC23AQ15436 765 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 ATP6AP1LQ52LC2 224 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 FNDC3BQ53EP0 1204 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 MED8Q96G25 268 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 SPATC1LQ9H0A9 340 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 GANQ9H2C0 597 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 KLHL31Q9H511 634 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 DDX4Q9NQI0 724 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 IARS2Q9NSE4 1012 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 TBC1D13Q9NVG8 400 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 STK39Q9UEW8 545 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 TDRKHQ9Y2W6 561 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 OGTO15294 1046 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 FLT3P36888 993 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 ITGA8P53708 1063 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 PURAQ00577 322 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 SNX12Q9UMY4 172 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 RPS6KL1Q9Y6S9 549 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 B2RBV5 119 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 PSTPIP1O43586 416 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 GNRH1P01148 92 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 RBP1P09455 135 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 ACOX1Q15067 660 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 CAPRIN2Q6IMN6 1127 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 SLITRK2Q9H156 845 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 SPG21Q9NZD8 308 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 DBR1Q9UK59 544 aaKnown RBP9.19□□□□□ -0.94
CTNND1-208ENST00000428599 PCDHB5Q9Y5E4 795 aa9.19□□□□□ -0.94
CTNND1-208ENST00000428599 A0A087X0T9 212 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 TMEM114B3SHH9 223 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 RBAK-RBAKDNI3L0D1 243 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ERFP50548 548 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ILF2Q12905 390 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CCDC103Q8IW40 242 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 DENND6AQ8IWF6 608 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 FICDQ9BVA6 458 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 KIAA1683Q9H0B3 1180 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ATXN3LQ9H3M9 355 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 SERHL2Q9H4I8 314 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 SERHLQ9NQF3 203 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ACSL4O60488 711 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 PQBP1O60828 265 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CNOT3O75175 753 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 KRT75O95678 551 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF682O95780 498 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 TAL1P17542 331 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CYP11B2P19099 503 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 MAGEA10P43363 369 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CLK3P49761 638 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 COPAP53621 1224 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 PLIN5Q00G26 463 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CES5AQ6NT32 575 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 APOBEC3HQ6NTF7 200 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ACOT1Q86TX2 421 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF557Q8N988 423 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 DPF2Q92785 391 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 SH3GL3Q99963 347 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 MTG1Q9BT17 334 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 RUSC1Q9BVN2 902 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ANAPC2Q9UJX6 822 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 FZD1Q9UP38 647 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 SMIM31A0A1B0GVY4 71 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 SDR42E2A6NKP2 422 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CHURC1-FNTBB4DL54 471 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 TM9SF1O15321 606 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 SKAP2O75563 359 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF23P17027 643 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 DSG3P32926 999 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 NPY2RP49146 381 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 NUDT2P50583 147 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 NFYCQ13952 458 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ALG11Q2TAA5 492 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 RNFT2Q96EX2 444 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 PPP1R16AQ96I34 528 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 OLFM1Q99784 485 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 PI4K2AQ9BTU6 479 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 BCL2L14Q9BZR8 327 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 FBXO44Q9H4M3 255 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ACTR8Q9H981 624 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 LRRC40Q9H9A6 602 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 PPIEQ9UNP9 301 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 FAM50BQ9Y247 325 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 FAM25AB3EWG3 89 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 FAM25CB3EWG5 89 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 FAM25GB3EWG6 89 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 H7C0S8 307 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 XPO1O14980 1071 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ITGAXP20702 1163 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 AKAP5P24588 427 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 MDH1P40925 334 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 NAMPTP43490 491 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ACTN3Q08043 901 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 MAD2L1Q13257 205 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 ARMCX4Q5H9R4 360 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 PCNX4Q63HM2 1172 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 AGMOQ6ZNB7 445 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms