RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.3□□□□□ -0.12
RPL28-202ENST00000426763 SPATA21Q7Z572 469 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 TOP6BLQ8N6T0 577 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 RBPJLQ9UBG7 517 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 TRHDEQ9UKU6 1024 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 TTC36A6NLP5 189 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 YBX3P16989 372 aaKnown RBP eCLIP14.3□□□□□ -0.122e-8■■■■□ 19.5
RPL28-202ENST00000426763 VCLP18206 1134 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 IGFBP4P22692 258 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 AMPD1P23109 780 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 CYP2C18P33260 490 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 HECTD3Q5T447 861 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 CSGALNACT1Q8TDX6 532 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 PTCH2Q9Y6C5 1203 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 LMNAP02545 664 aaKnown RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 TUSC3Q13454 348 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 OOSP2Q86WS3 158 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 FAM71AQ8IYT1 594 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 ANKRD52Q8NB46 1076 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 MYLPFQ96A32 169 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 ZIM3Q96PE6 472 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 APOL2Q9BQE5 337 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 CLPBQ9H078 707 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 PABPC3Q9H361 631 aaKnown RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 NXF3Q9H4D5 531 aaKnown RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 ZNF214Q9UL59 606 aaPredicted RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 SLC9A3R1O14745 358 aaPredicted RBP14.29□□□□□ -0.12
RPL28-202ENST00000426763 CHUKO15111 745 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 TREHO43280 583 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 TLL1O43897 1013 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 E2F6O75461 281 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 GNRH1P01148 92 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 NUMBP49757 651 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 PSMD5Q16401 504 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 BRI3BPQ8WY22 251 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 STN1Q9H668 368 aaKnown RBP14.29□□□□□ -0.12
RPL28-202ENST00000426763 ASAH2Q9NR71 780 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 MOXD2PA6NHM9 499 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 SIGLEC16A6NMB1 481 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 HACD1B0YJ81 288 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 AP5Z1O43299 807 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 PPP1R37O75864 691 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 AARSP49588 968 aaKnown RBP eCLIP14.29□□□□□ -0.12
RPL28-202ENST00000426763 SH2D3CQ8N5H7 860 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 ARL8AQ96BM9 186 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 TRAV19A0A0A6YYK7 116 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 ANGPT2O15123 496 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 PJA2O43164 708 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 TGFB1I1O43294 461 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 PPFIA2O75334 1257 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 CLK2P49760 499 aaKnown RBP14.29□□□□□ -0.12
RPL28-202ENST00000426763 CSE1LP55060 971 aaKnown RBP14.29□□□□□ -0.12
RPL28-202ENST00000426763 ILDR2Q71H61 639 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 HTR3CQ8WXA8 447 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 COG4Q9H9E3 785 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 MRGBPQ9NV56 204 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 IGLV3-22A0A075B6J6 115 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 A0A0B4J269 797 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 PRKCZQ05513 592 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 MIIPQ5JXC2 388 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 ERAP2Q6P179 960 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 WWOXQ9NZC7 414 aa14.29□□□□□ -0.12
RPL28-202ENST00000426763 PHRF1Q9P1Y6 1649 aaKnown RBP14.29□□□□□ -0.12
RPL28-202ENST00000426763 OR6C75A6NL08 312 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 PPP3CCP48454 512 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 CRHR2Q13324 411 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 HIST2H2ACQ16777 129 aaPredicted RBP14.28□□□□□ -0.12
RPL28-202ENST00000426763 C1orf146Q5VVC0 180 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 HIST2H2AA3Q6FI13 130 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 TSHZ1Q6ZSZ6 1077 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 SLC24A5Q71RS6 500 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.28□□□□□ -0.12
RPL28-202ENST00000426763 LPCAT1Q8NF37 534 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 IARS2Q9NSE4 1012 aaKnown RBP14.28□□□□□ -0.12
RPL28-202ENST00000426763 DNMT3LQ9UJW3 386 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 MAGEB16A2A368 324 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 CES2O00748 559 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 IGSF6O95976 241 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 INHAP05111 366 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 HSD17B3P37058 310 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 SERPINB8P50452 374 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 LRRC8DQ7L1W4 858 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 MIPOL1Q8TD10 442 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 SHC3Q92529 594 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 POU4F1Q01851 419 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 MTBPQ96DY7 904 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 PPP1R36Q96LQ0 422 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 RBAK-RBAKDNI3L0D1 243 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 GLP2RO95838 553 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 RARGP13631 454 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 LVRNQ6Q4G3 990 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 MFSD7Q6UXD7 560 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 DSG4Q86SJ6 1040 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 PIGZQ86VD9 579 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 SEZ6LQ9BYH1 1024 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 GANQ9H2C0 597 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 RIC8BQ9NVN3 520 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 VANGL2Q9ULK5 521 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 ARL2BPQ9Y2Y0 163 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms