RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 RPS6KC1Q96S38 1066 aa3.7□□□□□ -1.82
HDAC2-202ENST00000425835 SH2D3AQ9BRG2 576 aa3.7□□□□□ -1.82
HDAC2-202ENST00000425835 CINPQ9BW66 212 aaPredicted RBP3.7□□□□□ -1.82
HDAC2-202ENST00000425835 WDR12Q9GZL7 423 aaKnown RBP3.7□□□□□ -1.82
HDAC2-202ENST00000425835 OBP2BQ9NPH6 170 aa3.7□□□□□ -1.82
HDAC2-202ENST00000425835 NECTIN3Q9NQS3 549 aa3.7□□□□□ -1.82
HDAC2-202ENST00000425835 VPS45Q9NRW7 570 aa3.7□□□□□ -1.82
HDAC2-202ENST00000425835 PNMA6EA0A0J9YXQ4 647 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 TCRBV5S1A1TA0A578 114 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 LGALS16A8MUM7 142 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 PRRT4C9JH25 899 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 OVOL3O00110 214 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 CLIC1O00299 241 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 PCDH17O14917 1159 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 ASNA1O43681 348 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 CBFA2T3O75081 653 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 TNFRSF6BO95407 300 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 KLRK1P26718 216 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 DGKQP52824 942 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 ALDH18A1P54886 795 aaKnown RBP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 TUBA4AP68366 448 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 NHLH1Q02575 133 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 SRSF4Q08170 494 aaKnown RBP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 SLC10A2Q12908 348 aaPredicted RBP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 SEMA3BQ13214 749 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 C10orf62Q5T681 223 aaPredicted RBP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 CCDC144NLQ6NUI1 221 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 PGBD2Q6P3X8 592 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 SYCE2Q6PIF2 218 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 ZNF66Q6ZN08 573 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 PTF1AQ7RTS3 328 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 MYLK4Q86YV6 388 aaPredicted RBP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 C16orf71Q8IYS4 520 aaPredicted RBP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 ATG16L2Q8NAA4 619 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 ADAMTS18Q8TE60 1221 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 NTN5Q8WTR8 489 aaPredicted RBP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 C5orf34Q96MH7 638 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 FYTTD1Q96QD9 318 aaKnown RBP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 ADGRE3Q9BY15 652 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 FSCN3Q9NQT6 498 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 ADARB2Q9NS39 739 aaKnown RBP3.69□□□□□ -1.82
HDAC2-202ENST00000425835 LRFN1Q9P244 771 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 DTNAQ9Y4J8 743 aa3.69□□□□□ -1.82
HDAC2-202ENST00000425835 BTBD19C9JJ37 291 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 TMEM232C9JQI7 657 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 TRIM38O00635 465 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 DNPH1O43598 174 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 LDHAP00338 332 aaKnown RBP3.68□□□□□ -1.82
HDAC2-202ENST00000425835 CHRM5P08912 532 aaPredicted RBP3.68□□□□□ -1.82
HDAC2-202ENST00000425835 NPPBP16860 134 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 JAK3P52333 1124 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 MRPS21P82921 87 aaKnown RBP3.68□□□□□ -1.82
HDAC2-202ENST00000425835 CFHR3Q02985 330 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 SLC14A1Q13336 389 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 CSHL1Q14406 222 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 KCNJ12Q14500 433 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 GRM4Q14833 912 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 LARS2Q15031 903 aaKnown RBP3.68□□□□□ -1.82
HDAC2-202ENST00000425835 PUM3Q15397 648 aaKnown RBP3.68□□□□□ -1.82
HDAC2-202ENST00000425835 RINT1Q6NUQ1 792 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 VSTM1Q6UX27 236 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 PIK3AP1Q6ZUJ8 805 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 GATAD2AQ86YP4 633 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 LINC01465Q8N7H1 131 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 SEMA6DQ8NFY4 1073 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 EFHD1Q9BUP0 239 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 TMEM8AQ9HCN3 771 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 PDGFCQ9NRA1 345 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 HELLSQ9NRZ9 838 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 SCAF8Q9UPN6 1271 aaKnown RBP3.68□□□□□ -1.82
HDAC2-202ENST00000425835 PCDHB7Q9Y5E2 793 aa3.68□□□□□ -1.82
HDAC2-202ENST00000425835 CCDC187A0A096LP49 1063 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 GOLGA6L3A6NEY3 463 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 OR2W5A6NFC9 320 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 WIPF3A6NGB9 483 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 FCHO1O14526 889 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 TAF5LO75529 589 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 SKAP2O75563 359 aaPredicted RBP3.67□□□□□ -1.82
HDAC2-202ENST00000425835 RNF8O76064 485 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 CER1O95813 267 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 GLP2RO95838 553 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 ANXA6P08133 673 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 SLC3A2P08195 630 aaKnown RBP3.67□□□□□ -1.82
HDAC2-202ENST00000425835 ITGA5P08648 1049 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 CYP2A6P11509 494 aaPredicted RBP3.67□□□□□ -1.82
HDAC2-202ENST00000425835 PEPDP12955 493 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 PDIA3P30101 505 aaKnown RBP3.67□□□□□ -1.82
HDAC2-202ENST00000425835 IGHMBP2P38935 993 aaKnown RBP3.67□□□□□ -1.82
HDAC2-202ENST00000425835 ARHGAP25P42331 645 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 VPS41P49754 854 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 C21orf58P58505 322 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 WDR5P61964 334 aaKnown RBP3.67□□□□□ -1.82
HDAC2-202ENST00000425835 ICA1Q05084 483 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 DNASE1L3Q13609 305 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 MORC3Q14149 939 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 SPARCL1Q14515 664 aa3.67□□□□□ -1.82
HDAC2-202ENST00000425835 ZNF268Q14587 947 aaPredicted RBP3.67□□□□□ -1.82
HDAC2-202ENST00000425835 KPNB1Q14974 876 aaKnown RBP3.67□□□□□ -1.82
HDAC2-202ENST00000425835 CNGA3Q16281 694 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms