RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.33■□□□□ 0.2
SHOX2-202ENST00000425436 DMGDHQ9UI17 866 aaKnown RBP16.33■□□□□ 0.2
SHOX2-202ENST00000425436 CYTH4Q9UIA0 394 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 PATJQ8NI35 1801 aa16.33■□□□□ 0.2
SHOX2-202ENST00000425436 SART1O43290 800 aaKnown RBP16.32■□□□□ 0.2
SHOX2-202ENST00000425436 ATMINO43313 823 aaPredicted RBP16.32■□□□□ 0.2
SHOX2-202ENST00000425436 GABBR2O75899 941 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 PROSCO94903 275 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 HEXIM1O94992 359 aaKnown RBP16.32■□□□□ 0.2
SHOX2-202ENST00000425436 RTN3O95197 1032 aaPredicted RBP16.32■□□□□ 0.2
SHOX2-202ENST00000425436 F11P03951 625 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 SETSIPP0DME0 302 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 LCP1P13796 627 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 CEBPBP17676 345 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 TAF10Q12962 218 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 MAMLD1Q13495 774 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 CUL1Q13616 776 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 CASP8Q14790 479 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 TEAD2Q15562 447 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 STXBP5Q5T5C0 1151 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 NDRG1Q92597 394 aaKnown RBP16.32■□□□□ 0.2
SHOX2-202ENST00000425436 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 TRMT2BQ96GJ1 504 aaKnown RBP16.32■□□□□ 0.2
SHOX2-202ENST00000425436 CEP295NLQ96MC4 621 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 C11orf70Q9BRQ4 267 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 IP6K2Q9UHH9 426 aa16.32■□□□□ 0.2
SHOX2-202ENST00000425436 A0A0C4DFX4 3053 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 ZNF197O14709 1029 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 BMP1P13497 986 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 GBP2P32456 591 aaPredicted RBP16.31■□□□□ 0.2
SHOX2-202ENST00000425436 PLA2G4AP47712 749 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 PGFP49763 221 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 TKTL1P51854 596 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 CYP4F8P98187 520 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 ERICH1Q86X53 443 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 KLHL7Q8IXQ5 586 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 ALG3Q92685 438 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 FGF13Q92913 245 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 FBXO32Q969P5 355 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 MYADMQ96S97 322 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 TTLL2Q9BWV7 592 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 PHF7Q9BWX1 381 aaPredicted RBP16.31■□□□□ 0.2
SHOX2-202ENST00000425436 LRRC4Q9HBW1 653 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 PNPLA8Q9NP80 782 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 ST7Q9NRC1 585 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 IL37Q9NZH6 218 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 FAM50BQ9Y247 325 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 DENND4AQ7Z401 1863 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 DENND4CQ5VZ89 1909 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 OBSL1O75147 1896 aa16.31■□□□□ 0.2
SHOX2-202ENST00000425436 VCANP13611 3396 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 FAM187AA6NFU0 413 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 PSTPIP1O43586 416 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 USP17L7P0C7H9 530 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 CETN2P41208 172 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 GUCY2DQ02846 1103 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 ADIGQ0VDE8 80 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 DHX34Q14147 1143 aaKnown RBP16.3■□□□□ 0.2
SHOX2-202ENST00000425436 RAB41Q5JT25 222 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 DCAF12L1Q5VU92 463 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.3■□□□□ 0.2
SHOX2-202ENST00000425436 LEMD2Q8NC56 503 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 C1orf131Q8NDD1 294 aaKnown RBP16.3■□□□□ 0.2
SHOX2-202ENST00000425436 AENQ8WTP8 325 aaKnown RBP16.3■□□□□ 0.2
SHOX2-202ENST00000425436 CAVIN3Q969G5 261 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 ZSWIM3Q96MP5 696 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 AP1M1Q9BXS5 423 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 RAB17Q9H0T7 212 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 EPB41L5Q9HCM4 733 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 GMIPQ9P107 970 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 UXTQ9UBK9 157 aaPredicted RBP16.3■□□□□ 0.2
SHOX2-202ENST00000425436 MYO16Q9Y6X6 1858 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 ANAPC1Q9H1A4 1944 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 DOCK8Q8NF50 2099 aa16.3■□□□□ 0.2
SHOX2-202ENST00000425436 RAD51CO43502 376 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 SASH3O75995 380 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 CDC25CP30307 473 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 CHRNA3P32297 505 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 GSCP56915 257 aaPredicted RBP16.29■□□□□ 0.2
SHOX2-202ENST00000425436 SNX16P57768 344 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 SLC7A5Q01650 507 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 TXNDC8Q6A555 127 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 SCUBE3Q8IX30 993 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 NPAS3Q8IXF0 933 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 RHOT1Q8IXI2 618 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 KCTD13Q8WZ19 329 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 KRT35Q92764 455 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 SLITRK1Q96PX8 696 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 ULBP1Q9BZM6 244 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 FBXO44Q9H4M3 255 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 HOMER3Q9NSC5 361 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 COMMD8Q9NX08 183 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHOX2-202ENST00000425436 TJP2Q9UDY2 1190 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 UTP11Q9Y3A2 253 aaKnown RBP16.29■□□□□ 0.2
SHOX2-202ENST00000425436 USP3Q9Y6I4 520 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 ZNF840PA6NDX5 716 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 C2CD4DB7Z1M9 353 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms