RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 CHMP2AO43633 222 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 CCNT1O60563 726 aaKnown RBP6.49□□□□□ -1.37
LMBR1-204ENST00000415428 CSPG5O95196 566 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 ADH1BP00325 375 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 PTGER4P35408 488 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 ATP2C1P98194 919 aaPredicted RBP6.49□□□□□ -1.37
LMBR1-204ENST00000415428 TARDBPQ13148 414 aaKnown RBP eCLIP6.49□□□□□ -1.376e-10■■■□□ 17.6
LMBR1-204ENST00000415428 TBR1Q16650 682 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 ACBD5Q5T8D3 534 aaPredicted RBP6.49□□□□□ -1.37
LMBR1-204ENST00000415428 ANO7Q6IWH7 933 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 NUP93Q8N1F7 819 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 FBXO44Q9H4M3 255 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 RPF1Q9H9Y2 349 aaKnown RBP6.49□□□□□ -1.37
LMBR1-204ENST00000415428 GMIPQ9P107 970 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 HECAQ9UBI9 543 aaPredicted RBP6.49□□□□□ -1.37
LMBR1-204ENST00000415428 APPL1Q9UKG1 709 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 USP20Q9Y2K6 914 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 HBS1LQ9Y450 684 aaKnown RBP6.49□□□□□ -1.37
LMBR1-204ENST00000415428 PPEF2O14830 753 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 CEACAM4O75871 244 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 SLFN14P0C7P3 912 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 DRAP1Q14919 205 aaPredicted RBP6.49□□□□□ -1.37
LMBR1-204ENST00000415428 CAPRIN2Q6IMN6 1127 aaKnown RBP6.49□□□□□ -1.37
LMBR1-204ENST00000415428 OGFOD3Q6PK18 319 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 C1orf127Q8N9H9 656 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 VOPP1Q96AW1 172 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 TMEM60Q9H2L4 133 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 CYTH4Q9UIA0 394 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 ENTPD2Q9Y5L3 495 aa6.49□□□□□ -1.37
LMBR1-204ENST00000415428 ASCC3Q8N3C0 2202 aaKnown RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 hCG_1642624A0A1W2PR95 340 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 HEATR9A2RTY3 570 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 I3L4J1 428 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 WNT7AO00755 349 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 SORBS2O94875 1100 aaKnown RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 CXCL8P10145 99 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 ELAVL4P26378 380 aaKnown RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 HNRNPUQ00839 825 aaKnown RBP eCLIP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 LAMB3Q13751 1172 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 ISXQ2M1V0 245 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 SLC45A4Q5BKX6 768 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 SDE2Q6IQ49 451 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 KYAT3Q6YP21 454 aaKnown RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 DENND5BQ6ZUT9 1274 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 ANKS1BQ7Z6G8 1248 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 ADIPOR2Q86V24 386 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 CCDC83Q8IWF9 413 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 TPH2Q8IWU9 490 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 RAVER1Q8IY67 606 aaKnown RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 CACTINQ8WUQ7 758 aaKnown RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 TPSD1Q9BZJ3 242 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 GZF1Q9H116 711 aaPredicted RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 PCDHGA6Q9Y5G7 932 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 CFAP47Q6ZTR5 3102 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 EME2A4GXA9 379 aaPredicted RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 CFAP69A5D8W1 941 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 PLK4O00444 970 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 CLDN3O15551 220 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 USO1O60763 962 aaKnown RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 NDUFS2O75306 463 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 TEAD1P28347 426 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 PLA2G4AP47712 749 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 ANKRD1Q15327 319 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 USP37Q86T82 979 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 SLC9A9Q8IVB4 645 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 PIP4K2CQ8TBX8 421 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 XYLT2Q9H1B5 865 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 NUB1Q9Y5A7 615 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 FRYQ5TBA9 3013 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 CCDC187A0A096LP49 1063 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 PMM2O15305 246 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 EIF3DO15371 548 aaKnown RBP eCLIP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 HDCP19113 662 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 MAPK8P45983 427 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 USP46P62068 366 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 RBP5P82980 135 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 TRA2AQ13595 282 aaKnown RBP eCLIP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 SF3A1Q15459 793 aaKnown RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 IL17AQ16552 155 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 HECTD3Q5T447 861 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 DSTYKQ6XUX3 929 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 AHI1Q8N157 1196 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 ARHGAP18Q8N392 663 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 FRMD1Q8N878 549 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 RHBDD1Q8TEB9 315 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 GTF3C6Q969F1 213 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 ZNF668Q96K58 619 aaPredicted RBP6.48□□□□□ -1.37
LMBR1-204ENST00000415428 RUSC1Q9BVN2 902 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 CPQQ9Y646 472 aa6.48□□□□□ -1.37
LMBR1-204ENST00000415428 GAP43P17677 238 aa6.47□□□□□ -1.37
LMBR1-204ENST00000415428 ATXN3P54252 364 aaPredicted RBP6.47□□□□□ -1.37
LMBR1-204ENST00000415428 LY6G5CQ5SRR4 150 aa6.47□□□□□ -1.37
LMBR1-204ENST00000415428 WSCD1Q658N2 575 aa6.47□□□□□ -1.37
LMBR1-204ENST00000415428 SFTPA1Q8IWL2 248 aa6.47□□□□□ -1.37
LMBR1-204ENST00000415428 TTC39CQ8N584 583 aa6.47□□□□□ -1.37
LMBR1-204ENST00000415428 GJA10Q969M2 543 aa6.47□□□□□ -1.37
LMBR1-204ENST00000415428 VCPIP1Q96JH7 1222 aa6.47□□□□□ -1.37
LMBR1-204ENST00000415428 SLC26A6Q9BXS9 759 aa6.47□□□□□ -1.37
LMBR1-204ENST00000415428 BACH2Q9BYV9 841 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms