RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 TCTN1Q2MV58 587 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 SMTNL2Q2TAL5 461 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 SLC25A52Q3SY17 297 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 CTXN3Q4LDR2 81 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 SLC39A12Q504Y0 691 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 DCAF6Q58WW2 860 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 RAB41Q5JT25 222 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 ERMARDQ5T6L9 678 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 SH3PXD2AQ5TCZ1 1133 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 FAM171A1Q5VUB5 890 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 DUPD1Q68J44 220 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 TRNP1Q6NT89 227 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 DRICH1Q6PGQ1 229 aaPredicted RBP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 BBS12Q6ZW61 710 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 VSIG1Q86XK7 387 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 CEP57Q86XR8 500 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 PSTKQ8IV42 348 aaKnown RBP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 GSPT2Q8IYD1 628 aaKnown RBP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 DEFB106AQ8N104 65 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 SCML4Q8N228 414 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 BBOF1Q8ND07 529 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 ZMIZ2Q8NF64 920 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 OR10T2Q8NGX3 314 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 ATG4AQ8WYN0 398 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 SEC14L1Q92503 715 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 CENPIQ92674 756 aaPredicted RBP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 FUBP3Q96I24 572 aaKnown RBP eCLIP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 PAWRQ96IZ0 340 aaKnown RBP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 CCDC114Q96M63 670 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 SLC2A13Q96QE2 648 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 KCNK16Q96T55 309 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 PKMYT1Q99640 499 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 TRIM51Q9BSJ1 452 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 CALN1Q9BXU9 219 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 TRIM31Q9BZY9 425 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 ZMYND15Q9H091 742 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 ZCWPW1Q9H0M4 648 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 PRDM16Q9HAZ2 1276 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 CHST7Q9NS84 486 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 TMEM51Q9NW97 253 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 MTRF1LQ9UGC7 380 aaKnown RBP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 FKBPLQ9UIM3 349 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 ZNF148Q9UQR1 794 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 DRG1Q9Y295 367 aaKnown RBP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 R3HDM2Q9Y2K5 976 aaKnown RBP6.91□□□□□ -1.3
HDAC8-211ENST00000415409 SNX24Q9Y343 169 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 PCDHB5Q9Y5E4 795 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 CEP290O15078 2479 aa6.91□□□□□ -1.3
HDAC8-211ENST00000415409 EVPLQ92817 2033 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 ZNF487B1APH4 448 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 HHLA1C9JL84 531 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 APOL1O14791 398 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 MCF2LO15068 1137 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 LIASO43766 372 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 CST8O60676 142 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 ENDOD1O94919 500 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 F9P00740 461 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 TIMP1P01033 207 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 LTFP02788 710 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 GALTP07902 379 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 USP17L7P0C7H9 530 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 ATF2P15336 505 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 ITIH2P19823 946 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 FGFR3P22607 806 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 MAGEA11P43364 429 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 CACNA2D1P54289 1103 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 VCPP55072 806 aaKnown RBP6.9□□□□□ -1.3
HDAC8-211ENST00000415409 HDAC4P56524 1084 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 BCAR1P56945 870 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 CAV1Q03135 178 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 KRT17Q04695 432 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 DEUP1Q05D60 604 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 DHX9Q08211 1270 aaKnown RBP6.9□□□□□ -1.3
HDAC8-211ENST00000415409 CBLBQ13191 982 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 MTMR3Q13615 1198 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 BYSLQ13895 437 aaKnown RBP6.9□□□□□ -1.3
HDAC8-211ENST00000415409 MRPL58Q14197 206 aaKnown RBP6.9□□□□□ -1.3
HDAC8-211ENST00000415409 LRRC26Q2I0M4 334 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 HSP90B2PQ58FF3 399 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 ALS2CLQ60I27 953 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 PM20D1Q6GTS8 502 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 FUT10Q6P4F1 479 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 VSTM1Q6UX27 236 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDAC8-211ENST00000415409 ANKS3Q6ZW76 656 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 BEND5Q7L4P6 421 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 LRRTM3Q86VH5 581 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 DDX42Q86XP3 938 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDAC8-211ENST00000415409 SCN4BQ8IWT1 228 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 KRT222Q8N1A0 295 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 TMEM199Q8N511 208 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 MREGQ8N565 214 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 CCDC89Q8N998 374 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 LRRN4Q8WUT4 740 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 NKD2Q969F2 451 aaPredicted RBP6.9□□□□□ -1.3
HDAC8-211ENST00000415409 GDAP1L1Q96MZ0 367 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 PEBP4Q96S96 227 aa6.9□□□□□ -1.3
HDAC8-211ENST00000415409 KCTD15Q96SI1 283 aaPredicted RBP6.9□□□□□ -1.3
HDAC8-211ENST00000415409 TMEM209Q96SK2 561 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms