RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SYN1P17600 705 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 ATF6P18850 670 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 VCPP55072 806 aaKnown RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 BYSLQ13895 437 aaKnown RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 HLTFQ14527 1009 aaKnown RBP eCLIP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 OASLQ15646 514 aaKnown RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 BTBD8Q5XKL5 378 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 PSRC1Q6PGN9 363 aaPredicted RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 NPNTQ6UXI9 565 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 DENND5BQ6ZUT9 1274 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 DDX53Q86TM3 631 aaKnown RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 PSTKQ8IV42 348 aaKnown RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 PCDH19Q8TAB3 1148 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 SLC35B2Q8TB61 432 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 SPATA17Q96L03 361 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 MAK16Q9BXY0 300 aaKnown RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 FBXO44Q9H4M3 255 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 FAM114A2Q9NRY5 505 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 ABCC13Q9NSE7 274 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 OSER1Q9NX31 292 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 IL37Q9NZH6 218 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 GMIPQ9P107 970 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 SNX24Q9Y343 169 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 NEU2Q9Y3R4 380 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 ZNF487B1APH4 448 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 I6L893 689 aaPredicted RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 APOC4-APOC2K7ER74 178 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 APOC2P02655 101 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 FAM153BP0C7A2 387 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 TNNT3P45378 269 aaPredicted RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 RPL21P46778 160 aaKnown RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 MTMR3Q13615 1198 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 PTK6Q13882 451 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 FAM153CQ494X1 144 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 SLC9A4Q6AI14 798 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 PLD5Q8N7P1 536 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 EIF1ADQ8N9N8 165 aaKnown RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 TTC13Q8NBP0 860 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 NKD2Q969F2 451 aaPredicted RBP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 NTAN1Q96AB6 310 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 CSPG4P5Q96PW8 444 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 SLC9A7Q96T83 725 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 FUT8Q9BYC5 575 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.61□□□□□ -0.07
GPNMB-203ENST00000409458 GRHL1Q9NZI5 618 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 FAM153AQ9UHL3 310 aa14.61□□□□□ -0.07
GPNMB-203ENST00000409458 PLXNA4Q9HCM2 1894 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 FAM92AA1XBS5 289 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 CARNS1A5YM72 827 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 APOL1O14791 398 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 IRAK2O43187 625 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 GAS8O95995 478 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 URODP06132 367 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 GOT1P17174 413 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 PPM1AP35813 382 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 SCAPQ12770 1279 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 TFDP2Q14188 446 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 TRIP13Q15645 432 aaPredicted RBP14.6□□□□□ -0.07
GPNMB-203ENST00000409458 EFHC2Q5JST6 749 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 EMBQ6PCB8 327 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 SYDE1Q6ZW31 735 aaPredicted RBP14.6□□□□□ -0.07
GPNMB-203ENST00000409458 SND1Q7KZF4 910 aaKnown RBP eCLIP14.6□□□□□ -0.07
GPNMB-203ENST00000409458 PRUNE1Q86TP1 453 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 VPS52Q8N1B4 723 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 GIPC2Q8TF65 315 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 AUTS2Q8WXX7 1259 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 CASP10Q92851 521 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 CAVIN3Q969G5 261 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 FBXO32Q969P5 355 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 FRMD8P1Q9BZ68 369 aaPredicted RBP14.6□□□□□ -0.07
GPNMB-203ENST00000409458 SMOC2Q9H3U7 446 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 CWC15Q9P013 229 aaKnown RBP14.6□□□□□ -0.07
GPNMB-203ENST00000409458 FBXW11Q9UKB1 542 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 NUDT5Q9UKK9 219 aa14.6□□□□□ -0.07
GPNMB-203ENST00000409458 ZMYND8Q9ULU4 1186 aaPredicted RBP14.6□□□□□ -0.07
GPNMB-203ENST00000409458 RTN3O95197 1032 aaPredicted RBP14.59□□□□□ -0.07
GPNMB-203ENST00000409458 SEC24AO95486 1093 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 F9P00740 461 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 TGM2P21980 687 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 DNAJB2P25686 324 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 YWHAQP27348 245 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 ADRA1BP35368 520 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 CXCR3P49682 368 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 AIF1P55008 147 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 DRG2P55039 364 aaKnown RBP14.59□□□□□ -0.07
GPNMB-203ENST00000409458 RPL10AP62906 217 aaKnown RBP14.59□□□□□ -0.07
GPNMB-203ENST00000409458 EIF4EBP2Q13542 120 aaPredicted RBP14.59□□□□□ -0.07
GPNMB-203ENST00000409458 NOMO1Q15155 1222 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 C1orf228Q6PIY5 440 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 ZDHHC24Q6UX98 284 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 HDXQ7Z353 690 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 MON1AQ86VX9 555 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 FIBCD1Q8N539 461 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 ALLCQ8N6M5 410 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 RNF139Q8WU17 664 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 HERVK_113Q902F9 699 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 TMEM121Q9BTD3 319 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 ZBED2Q9BTP6 218 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 C10orf88Q9H8K7 445 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms