RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 UHRF1BP1Q6BDS2 1440 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 TNRQ92752 1358 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 RPGRIP1LQ68CZ1 1315 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 MYO3AQ8NEV4 1616 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 LOC102724159A0A0B4J2E5 919 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 ACKR2O00590 384 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 PCDH17O14917 1159 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 SLC5A2P31639 672 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 NSUN2Q08J23 767 aaKnown RBP eCLIP5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 PWP2Q15269 919 aaKnown RBP5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 NBPF8Q3BBV2 869 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 FNDC1Q4ZHG4 1894 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 CACNA2D3Q8IZS8 1091 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 FSTL5Q8N475 847 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 MBD3L2Q8NHZ7 208 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 FAM71BQ8TC56 605 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 WDYHV1Q96HA8 205 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 PRR25Q96S07 402 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 POLR3GLQ9BT43 218 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 DPCDQ9BVM2 203 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 ARHGEF3Q9NR81 526 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 FOXJ2Q9P0K8 574 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 LPAR3Q9UBY5 353 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 CCNL1Q9UK58 526 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 DTNAQ9Y4J8 743 aa5.78□□□□□ -1.48
HMGB3P19-201ENST00000403971 TRPM1Q7Z4N2 1603 aa5.77□□□□□ -1.48
HMGB3P19-201ENST00000403971 PTPRMP28827 1452 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 MYOM2P54296 1465 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 ZFYVE9O95405 1425 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 OR2W5A6NFC9 320 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 AP4M1O00189 453 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 MGST3O14880 152 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 ZSCAN9O15535 394 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 URI1O94763 535 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 NXPH3O95157 252 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 EBLN1P0CF75 366 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 NPPBP16860 134 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 ENGP17813 658 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 CTGFP29279 349 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 CYP2C18P33260 490 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 SERPINF1P36955 418 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 GRIA3P42263 894 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 E2F1Q01094 437 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 TAP1Q03518 808 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 ATP1A4Q13733 1029 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 IDI1Q13907 227 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 PTK2BQ14289 1009 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 INO80DQ53TQ3 878 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 ARL6IP4Q66PJ3 421 aaKnown RBP5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 LAIR1Q6GTX8 287 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 KRT73Q86Y46 540 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 OR1N1Q8NGS0 311 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 SUN3Q8TAQ9 357 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 TTPALQ9BTX7 342 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 MAGEH1Q9H213 219 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 FSCN3Q9NQT6 498 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 DACT1Q9NYF0 836 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 ING1Q9UK53 422 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 NEXMIFQ5QGS0 1516 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 COL15A1P39059 1388 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 LAMC1P11047 1609 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 A2ML1A8K2U0 1454 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 NRXN1Q9ULB1 1477 aa5.77□□□□□ -1.49
HMGB3P19-201ENST00000403971 CEP170BQ9Y4F5 1589 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 J3KTA2 159 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 PSMD9O00233 223 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 SYT5O00445 386 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 SPRY2O43597 315 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 CBFA2T3O75081 653 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 FZD7O75084 574 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 PMPCBO75439 489 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 ONECUT2O95948 504 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 VIPP01282 170 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 GYS1P13807 737 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 ITPKBP27987 946 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 PBX1P40424 430 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 ZXDAP98168 799 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 KLF10Q13118 480 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 ZNF169Q14929 603 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 PDCD2Q16342 344 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 LIN54Q6MZP7 749 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 Q6ZWC4 215 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 ZNF551Q7Z340 670 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 RASGRP3Q8IV61 690 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 ANKRD42Q8N9B4 389 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 ABHD5Q8WTS1 349 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 PDLIM2Q96JY6 352 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 SORBS1Q9BX66 1292 aaKnown RBP5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 TMEM8AQ9HCN3 771 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 SERTAD4Q9NUC0 356 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 DLL3Q9NYJ7 618 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 ASAP1Q9ULH1 1129 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 SH2B3Q9UQQ2 575 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 PCDHGB3Q9Y5G1 929 aa5.76□□□□□ -1.49
HMGB3P19-201ENST00000403971 PRAG1Q86YV5 1406 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 SLIT1O75093 1534 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 hCG_1642624A0A1W2PR95 340 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 DNPH1O43598 174 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 WDR47O94967 919 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 PDE8BO95263 885 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms