RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 CENPUQ71F23 418 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 ZNF280BQ86YH2 543 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 NTAN1Q96AB6 310 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 CENPTQ96BT3 561 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 WDR6Q9NNW5 1121 aaKnown RBP12.73□□□□□ -0.37
CLIP4-203ENST00000401617 HEY1Q9Y5J3 304 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 VWA8A3KMH1 1905 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 TTC3P53804 2025 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 A0A087WUV0 522 aaPredicted RBP12.73□□□□□ -0.37
CLIP4-203ENST00000401617 TCRBV7S3A2A0A539 114 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 F8W810 466 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 M0QYT0 321 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 TMEM63AO94886 807 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 LTFP02788 710 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 USP17L7P0C7H9 530 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 SELPP16109 830 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 NRLP54845 237 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 GBE1Q04446 702 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 FASTKD3Q14CZ7 662 aaKnown RBP12.73□□□□□ -0.37
CLIP4-203ENST00000401617 HIF1AQ16665 826 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 NCBP2-AS2Q69YL0 99 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 LRRC8DQ7L1W4 858 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 BEND5Q7L4P6 421 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 THEM5Q8N1Q8 247 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 PYROXD2Q8N2H3 581 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 HASPINQ8TF76 798 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 OLFM3Q96PB7 478 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 RHOBTB2Q9BYZ6 727 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLIP4-203ENST00000401617 DMAP1Q9NPF5 467 aaPredicted RBP12.73□□□□□ -0.37
CLIP4-203ENST00000401617 PIGVQ9NUD9 493 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 SAGE1Q9NXZ1 904 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 PAK5Q9P286 719 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 KANSL3Q9P2N6 904 aa12.73□□□□□ -0.37
CLIP4-203ENST00000401617 SMIM23A6NLE4 172 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 CHADO15335 359 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 DGKIO75912 1065 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 IVLP07476 585 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 GOT1P17174 413 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 BDNFP23560 247 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 YY1P25490 414 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 RBL1P28749 1068 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 ARL4AP40617 200 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 SLCO1A2P46721 670 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 CDR1P51861 262 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 ARL4CP56559 192 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 GAD2Q05329 585 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 DEUP1Q05D60 604 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 SEMA3BQ13214 749 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 SLC45A4Q5BKX6 768 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 FNBP1LQ5T0N5 605 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 C4orf22Q6V702 233 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 EXOC3L1Q86VI1 746 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 TDRPQ86YL5 185 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 CDKL3Q8IVW4 592 aaPredicted RBP12.72□□□□□ -0.37
CLIP4-203ENST00000401617 FAM126BQ8IXS8 530 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 RIBC1Q8N443 379 aaPredicted RBP12.72□□□□□ -0.37
CLIP4-203ENST00000401617 QKIQ96PU8 341 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLIP4-203ENST00000401617 TMEM209Q96SK2 561 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 CCDC77Q9BR77 488 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 EPN3Q9H201 632 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 ELAC1Q9H777 363 aaKnown RBP12.72□□□□□ -0.37
CLIP4-203ENST00000401617 ARHGEF4Q9NR80 690 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 TMEM161AQ9NX61 479 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 DTLQ9NZJ0 730 aa12.72□□□□□ -0.37
CLIP4-203ENST00000401617 SF3B1O75533 1304 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLIP4-203ENST00000401617 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 E7EVH7 732 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 KCNN4O15554 427 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 GCATO75600 419 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 OAZ2O95190 189 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 IBSPP21815 317 aaPredicted RBP12.71□□□□□ -0.37
CLIP4-203ENST00000401617 AMPD1P23109 780 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 ADRA1BP35368 520 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 TSPY1Q01534 308 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 PDIA2Q13087 525 aaKnown RBP12.71□□□□□ -0.37
CLIP4-203ENST00000401617 RASA2Q15283 850 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 MSS51Q4VC12 460 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 PLEKHG4Q58EX7 1191 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 B4GALNT4Q76KP1 1039 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 URGCPQ8TCY9 931 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 RNF139Q8WU17 664 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 WDR83Q9BRX9 315 aaKnown RBP12.71□□□□□ -0.37
CLIP4-203ENST00000401617 ETNK2Q9NVF9 386 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 TBC1D13Q9NVG8 400 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 FBXW11Q9UKB1 542 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 MYO18AQ92614 2054 aaKnown RBP12.71□□□□□ -0.37
CLIP4-203ENST00000401617 HACD1B0YJ81 288 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 H3BRJ5 948 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 DNM1LO00429 736 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 NBNO60934 754 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 CDH16O75309 829 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 TSHRP16473 764 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 GCAP28676 217 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 DPYSQ14117 519 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 SKIDA1Q1XH10 827 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 ZBED8Q8IZ13 594 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 FRMD8Q9BZ67 464 aaPredicted RBP12.71□□□□□ -0.37
CLIP4-203ENST00000401617 XPO7Q9UIA9 1087 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms