RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SLC15A5A6NIM6 579 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 BIRC5O15392 142 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 KLHL2O95198 593 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 PENKP01210 267 aaPredicted RBP14.46□□□□□ -0.09
APOB-202ENST00000399256 PIM1P11309 404 aaPredicted RBP14.46□□□□□ -0.09
APOB-202ENST00000399256 NCF2P19878 526 aaPredicted RBP14.46□□□□□ -0.09
APOB-202ENST00000399256 RBL1P28749 1068 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 SLC1A6P48664 564 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 SCNN1BP51168 640 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 SMAD1Q15797 465 aaKnown RBP14.46□□□□□ -0.09
APOB-202ENST00000399256 TEDDM1Q5T9Z0 273 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 PGM2L1Q6PCE3 622 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 RAB3IL1Q8TBN0 382 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 VPS33BQ9H267 617 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 RSAD1Q9HA92 442 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 MKS1Q9NXB0 559 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 PCDHGC3Q9UN70 934 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 ATP5BP06576 529 aaKnown RBP14.46□□□□□ -0.1
APOB-202ENST00000399256 ITGA2BP08514 1039 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 ITGAXP20702 1163 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 MYBPC3Q14896 1274 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 MAP3K21Q5TCX8 1036 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 MBLAC2Q68D91 279 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 ARCQ7LC44 396 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 XYLT1Q86Y38 959 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 NLGN2Q8NFZ4 835 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 RDM1Q8NG50 284 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.46□□□□□ -0.1
APOB-202ENST00000399256 DEPDC1BQ8WUY9 529 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 LENG1Q96BZ8 264 aaPredicted RBP14.46□□□□□ -0.1
APOB-202ENST00000399256 USP29Q9HBJ7 922 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 PAK5Q9P286 719 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 NXF1Q9UBU9 619 aaKnown RBP14.46□□□□□ -0.1
APOB-202ENST00000399256 PCDHGB4Q9UN71 923 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 SORCS3Q9UPU3 1222 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 DTNAQ9Y4J8 743 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 PCDHGB5Q9Y5G0 923 aa14.46□□□□□ -0.1
APOB-202ENST00000399256 ARID2Q68CP9 1835 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 PIK3R2O00459 728 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 TRDMT1O14717 391 aaKnown RBP14.45□□□□□ -0.1
APOB-202ENST00000399256 L1CAMP32004 1257 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 YWHAEP62258 255 aaKnown RBP14.45□□□□□ -0.1
APOB-202ENST00000399256 TBL3Q12788 808 aaKnown RBP14.45□□□□□ -0.1
APOB-202ENST00000399256 TLR1Q15399 786 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 OLFML2BQ68BL8 750 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 PDPK2PQ6A1A2 396 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 ATG14Q6ZNE5 492 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 TMC7Q7Z402 723 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 UNC5BQ8IZJ1 945 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 ACTRT2Q8TDY3 377 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 JADE3Q92613 823 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 FAM210AQ96ND0 272 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 IFT122Q9HBG6 1241 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 ZNF70Q9UC06 446 aaPredicted RBP14.45□□□□□ -0.1
APOB-202ENST00000399256 ADGRA2Q96PE1 1338 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 H3BNX3 289 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 VILLO15195 856 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 FGF3P11487 239 aaPredicted RBP14.45□□□□□ -0.1
APOB-202ENST00000399256 XIAPP98170 497 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 TRPC3Q13507 836 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 BAATQ14032 418 aaPredicted RBP14.45□□□□□ -0.1
APOB-202ENST00000399256 FRMD7Q6ZUT3 714 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 FAM151AQ8WW52 585 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 TCHPQ9BT92 498 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 DDX18Q9NVP1 670 aaKnown RBP14.45□□□□□ -0.1
APOB-202ENST00000399256 HSFX1Q9UBD0 423 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 ITGA11Q9UKX5 1188 aa14.45□□□□□ -0.1
APOB-202ENST00000399256 CTDP1Q9Y5B0 961 aaPredicted RBP14.45□□□□□ -0.1
APOB-202ENST00000399256 ATG7O95352 703 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 GSRP00390 522 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 FAM200BP0CF97 657 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 KCNA2P16389 499 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 PMLP29590 882 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 IDH3AP50213 366 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 ACTR2P61160 394 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 TFAMQ00059 246 aaKnown RBP14.44□□□□□ -0.1
APOB-202ENST00000399256 CDO1Q16878 200 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 N4BP2L1Q5TBK1 243 aaPredicted RBP14.44□□□□□ -0.1
APOB-202ENST00000399256 PHTF2Q8N3S3 785 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 CCDC33Q8N5R6 958 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 TFB1MQ8WVM0 346 aaKnown RBP14.44□□□□□ -0.1
APOB-202ENST00000399256 DGCR14Q96DF8 476 aaKnown RBP14.44□□□□□ -0.1
APOB-202ENST00000399256 PRICKLE1Q96MT3 831 aaPredicted RBP14.44□□□□□ -0.1
APOB-202ENST00000399256 SDCBP2Q9H190 292 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 JPH1Q9HDC5 661 aaPredicted RBP14.44□□□□□ -0.1
APOB-202ENST00000399256 GPATCH2LQ9NWQ4 482 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 EMCNQ9ULC0 261 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 SCAF8Q9UPN6 1271 aaKnown RBP14.44□□□□□ -0.1
APOB-202ENST00000399256 COL2A1P02458 1487 aaPredicted RBP14.44□□□□□ -0.1
APOB-202ENST00000399256 NFKBIEO00221 500 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 ATP9BO43861 1147 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 ZBED1O96006 694 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 NR3C2P08235 984 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 ATP6V1B1P15313 513 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 FDFT1P37268 417 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 ALDH1A3P47895 512 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 GHRHRQ02643 423 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 ZNF699Q32M78 642 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 TMEM130Q8N3G9 435 aa14.44□□□□□ -0.1
APOB-202ENST00000399256 FNIP1Q8TF40 1166 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms