RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 TELO2Q9Y4R8 837 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 ASS1P00966 412 aaKnown RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 OSBPP22059 807 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 MIPP30301 263 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 CPOXP36551 454 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 COPAP53621 1224 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 SH3BGRP55822 239 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 MAP3K10Q02779 954 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 WASHC5Q12768 1159 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 MMRN1Q13201 1228 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 GK3PQ14409 553 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 GRAMD1BQ3KR37 738 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 NADK2Q4G0N4 442 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 KLC3Q6P597 504 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 ADGRG6Q86SQ4 1221 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 CDAN1Q8IWY9 1227 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 METTL25Q8N6Q8 603 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 PIP4K2CQ8TBX8 421 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 TCHPQ9BT92 498 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 MTMR12Q9C0I1 747 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 SPON1Q9HCB6 807 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 PXMP2Q9NR77 195 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 THAP1Q9NVV9 213 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 APOBEC2Q9Y235 224 aaKnown RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 DNAJC16Q9Y2G8 782 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 HEY1Q9Y5J3 304 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 MAD1L1Q9Y6D9 718 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 SDR42E2A6NKP2 422 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 CHADO15335 359 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 KCNN4O15554 427 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 TOP3BO95985 862 aaKnown RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 PROCP04070 461 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 ATP5BP06576 529 aaKnown RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 PSAPP07602 524 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 APRTP07741 180 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 AOC1P19801 751 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 CDH6P55285 790 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 TRPC3Q13507 836 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 EMC2Q15006 297 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 PDK3Q15120 406 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 KLHL35Q6PF15 583 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 ZDHHC7Q9NXF8 308 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 BTBD7Q9P203 1132 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 ADAMTS6Q9UKP5 1117 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 BARX2Q9UMQ3 279 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 STYXL1Q9Y6J8 313 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 C15orf38-AP3S2A0A0A6YYH1 394 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 LRRC37AA6NMS7 1700 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 SNNO75324 88 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 LYPLA1O75608 230 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 KLHL2O95198 593 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 STBD1O95210 358 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 CSH1P0DML2 217 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 CSH2P0DML3 217 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 MYH9P35579 1960 aaKnown RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 BTG3Q14201 252 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 RABGAP1LQ5R372 815 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 B3GNT6Q6ZMB0 384 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 RNF111Q6ZNA4 994 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 ARPINQ7Z6K5 226 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 RSPH3Q86UC2 560 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 CCDC60Q8IWA6 550 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-206ENST00000397163 RIN3Q8TB24 985 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 GAB3Q8WWW8 586 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 MMP19Q99542 508 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 RSAD1Q9HA92 442 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 PNPLA8Q9NP80 782 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 PDLIM7Q9NR12 457 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 SMYD2Q9NRG4 433 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 PAK5Q9P286 719 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 CNTNAP2Q9UHC6 1331 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 SORCS3Q9UPU3 1222 aa9.48□□□□□ -0.89
CAPN3-206ENST00000397163 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 ADCY3O60266 1144 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 APOEP02649 317 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 RAG1P15918 1043 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 CDK18Q07002 472 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 CCNIQ14094 377 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 TAZQ16635 292 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 FASTKD1Q53R41 847 aaKnown RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 IYDQ6PHW0 289 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 TSHZ1Q6ZSZ6 1077 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 ZBTB33Q86T24 672 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 UBR7Q8N806 425 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 FAM151AQ8WW52 585 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 OXCT2Q9BYC2 517 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 POPDC2Q9HBU9 364 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 PACSIN3Q9UKS6 424 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 USP18Q9UMW8 372 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 LOC100653049A0A140TA62 436 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 SMIM31A0A1B0GVY4 71 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 FOXD2O60548 495 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 KRT34O76011 436 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 MAP3K6O95382 1288 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 C1QAP02745 245 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 CRHR1P34998 444 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms