RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 FOXN1O15353 648 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 GDF11O95390 407 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 LBPP18428 481 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 ADSSP30520 456 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 NSUN2Q08J23 767 aaKnown RBP eCLIP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 RIN1Q13671 783 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 HIST2H3PS2Q5TEC6 136 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 TOGARAM2Q6ZUX3 1019 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 NEDD4LQ96PU5 975 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 SLITRK2Q9H156 845 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 SSU72Q9NP77 194 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 LATS2Q9NRM7 1088 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 UBQLN1Q9UMX0 589 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PCDHGC3Q9UN70 934 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PCDHB12Q9Y5F1 795 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PCDHGA4Q9Y5G9 962 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 SPAG17Q6Q759 2223 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 CCDC195A0A1B0GUA6 201 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PDE2AO00408 941 aaPredicted RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 MAP3K8P41279 467 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 HSPA13P48723 471 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 TNK2Q07912 1038 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 EIPR1Q53HC9 387 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PKN3Q6P5Z2 889 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 SSX9Q7RTT3 188 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 RMND5BQ96G75 393 aaPredicted RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PHF20Q9BVI0 1012 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 RBCK1Q9BYM8 510 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 KRCC1Q9NPI7 259 aaPredicted RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 HERC5Q9UII4 1024 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PCDHAC2Q9Y5I4 1007 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 STX16-NPEPL1H3BU86 382 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 WDPCPO95876 746 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 NMT1P30419 496 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 NOS2P35228 1153 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 KCNJ5P48544 419 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 CAV1Q03135 178 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 ATF7IP2Q5U623 682 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 MFSD6Q6ZSS7 791 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 SLC41A3Q96GZ6 507 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PCYT2Q99447 389 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 ADAM33Q9BZ11 813 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 IGFLR1Q9H665 355 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 DCLRE1BQ9H816 532 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PCDHB8Q9UN66 801 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 CTNND2Q9UQB3 1225 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 GRIP1Q9Y3R0 1128 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 MROH7-TTC4A0A0A0MT08 1334 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 FAM172BPA6NC97 362 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 B4E1Z4 1266 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 KCNK3O14649 394 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PQBP1O60828 265 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 GATBO75879 557 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 ASMTLO95671 621 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 CFBP00751 764 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 FGFR1P11362 822 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PMLP29590 882 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 POU4F2Q12837 409 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 ARHGEF6Q15052 776 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PLEKHG6Q3KR16 790 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 TRIM61Q5EBN2 209 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 BEND6Q5SZJ8 279 aaPredicted RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 SSX7Q7RTT5 188 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 ZNF367Q7RTV3 350 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 DNAJA4Q8WW22 397 aaPredicted RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 TCEAL7Q9BRU2 100 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PRRG3Q9BZD7 231 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 COMMD8Q9NX08 183 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 RAB20Q9NX57 234 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 MAGEB17A8MXT2 336 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 ADAM11O75078 769 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 MYO1DO94832 1006 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 TFRCP02786 760 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 FAM58BPP0C7Q3 252 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PCSK2P16519 638 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 NR1D1P20393 614 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 TMPOP42166 694 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 MAGEA1P43355 309 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PEX3P56589 373 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 EIF4A1P60842 406 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 USP46P62068 366 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 COBLL1Q53SF7 1204 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 IFIT1BQ5T764 474 aaKnown RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PET117Q6UWS5 81 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 ESPNLQ6ZVH7 1005 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 OTOAQ7RTW8 1153 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 UBE2J2Q8N2K1 259 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 CD300LFQ8TDQ1 290 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 KCNN1Q92952 543 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PLGRKTQ9HBL7 147 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 FAM118AQ9NWS6 357 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 CFL2Q9Y281 166 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 PCDHA1Q9Y5I3 950 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 A8MVJ9 347 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 DPYSL4O14531 572 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 SLC9A3R1O14745 358 aaPredicted RBP4.91□□□□□ -1.62
PTCD2-202ENST00000380639 SGTAO43765 313 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 GGPS1O95749 300 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 WEE2P0C1S8 567 aa4.91□□□□□ -1.62
PTCD2-202ENST00000380639 ITIH2P19823 946 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms