RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 NOL4O94818 638 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MUTP22033 750 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PRR5LQ6MZQ0 368 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TAS2R42Q7RTR8 314 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 VGLL2Q8N8G2 317 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TNIP2Q8NFZ5 429 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 KAT5Q92993 513 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TAAR1Q96RJ0 339 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TMEM39BQ9GZU3 492 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 AP5M1Q9H0R1 490 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TMEM245Q9H330 911 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 HPS4Q9NQG7 708 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 STK32BQ9NY57 414 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 FAM53CQ9NYF3 392 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 RNF112Q9ULX5 631 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 NUP98P52948 1817 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SERPINA6P08185 405 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 XPAP23025 273 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CYP2F1P24903 491 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MYL6P60660 151 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CYP24A1Q07973 514 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 NFYCQ13952 458 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 KHDC1Q4VXA5 237 aaKnown RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TTC7BQ86TV6 843 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MAML3Q96JK9 1138 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TTYH3Q9C0H2 523 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 HMG20AQ9NP66 347 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ANKEF1Q9NU02 776 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 NSMCE4AQ9NXX6 385 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SCN11AQ9UI33 1791 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 WDR27A2RRH5 827 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 F8W8V4 182 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 UBDO15205 165 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TSC22D2O75157 780 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 DDHD2O94830 711 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ME2P23368 584 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 MGAT1P26572 445 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 GRIA3P42263 894 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 USP4Q13107 963 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 MFSD7Q6UXD7 560 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 FAM71AQ8IYT1 594 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TTC39CQ8N584 583 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 KLHL23Q8NBE8 558 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 VCPIP1Q96JH7 1222 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 NR5A2O00482 541 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 NPTXRO95502 500 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 VCLP18206 1134 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ATP6V1E1P36543 226 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ATP6AP1LQ52LC2 224 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 FAM131BQ86XD5 332 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 HPS6Q86YV9 775 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 EZH1Q92800 747 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TSPAN17Q96FV3 270 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 A1CFQ9NQ94 594 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 IMPAD1Q9NX62 359 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SHOC2Q9UQ13 582 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PKP3Q9Y446 797 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ZMYM2Q9UBW7 1377 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 KDM6AO15550 1401 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ASTN1O14525 1302 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 LMO7Q8WWI1 1683 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PRPF4O43172 522 aaKnown RBP eCLIP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PSMD3O43242 534 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 DCTN2Q13561 401 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PTK6Q13882 451 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PDK2Q15119 407 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TMEM119Q4V9L6 283 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ARSHQ5FYA8 562 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 GPR107Q5VW38 600 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 BTBD8Q5XKL5 378 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PIGWQ7Z7B1 504 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SATL1Q86VE3 508 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF280CQ8ND82 737 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 FAM13CQ8NE31 585 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TMEM176AQ96HP8 235 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RTFDC1Q9BY42 306 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 GANQ9H2C0 597 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 LRRC40Q9H9A6 602 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 EXOSC4Q9NPD3 245 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TSPAN16Q9UKR8 245 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CRYL1Q9Y2S2 319 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 FAM32AQ9Y421 112 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 COMMD3-BMI1R4GMX3 469 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 C4AP0C0L4 1744 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 C4BP0C0L5 1744 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CCDC154A6NI56 674 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF862O60290 1169 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CLASP2O75122 1294 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 MFN2O95140 757 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RBL1P28749 1068 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 EPHA3P29320 983 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TCF7P36402 384 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RARRES1P49788 294 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 NCALDP61601 193 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RUNX1T1Q06455 604 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF235Q14590 738 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 LINC00523Q86TU6 105 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ECHDC2Q86YB7 292 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 STKLD1Q8NE28 680 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms