RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 ZDHHC7Q9NXF8 308 aa13.17□□□□□ -0.3
CHGB-201ENST00000378961 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
CHGB-201ENST00000378961 SHOC2Q9UQ13 582 aa13.17□□□□□ -0.3
CHGB-201ENST00000378961 XPO1O14980 1071 aaKnown RBP13.16□□□□□ -0.3
CHGB-201ENST00000378961 DGAT1O75907 488 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 ALDH1A3P47895 512 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 CYLC2Q14093 348 aaPredicted RBP13.16□□□□□ -0.3
CHGB-201ENST00000378961 KLHL38Q2WGJ6 581 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 MTERF2Q49AM1 385 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 ZNF394Q53GI3 561 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 CYP4A22Q5TCH4 519 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 MROH9Q5TGP6 573 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 ABHD15Q6UXT9 468 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 LBX2Q6XYB7 198 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 PHTF2Q8N3S3 785 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 NAT8LQ8N9F0 302 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHGB-201ENST00000378961 SSU72Q9NP77 194 aaKnown RBP13.16□□□□□ -0.3
CHGB-201ENST00000378961 PFDN4Q9NQP4 134 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 BTBD7Q9P203 1132 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 GMEB1Q9Y692 573 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 hCG_1818297A0A087WSY0 165 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 F5H423 210 aaPredicted RBP13.16□□□□□ -0.3
CHGB-201ENST00000378961 SRGAP2CP0DJJ0 459 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 SRGAP2BP0DMP2 458 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 NCF2P19878 526 aaPredicted RBP13.16□□□□□ -0.3
CHGB-201ENST00000378961 RPL10AP62906 217 aaKnown RBP13.16□□□□□ -0.3
CHGB-201ENST00000378961 SP2Q02086 613 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 PPIDQ08752 370 aaKnown RBP13.16□□□□□ -0.3
CHGB-201ENST00000378961 TAF5Q15542 800 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 TMEM259Q4ZIN3 620 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 NPNTQ6UXI9 565 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 MOCOSQ96EN8 888 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 MAF1Q9H063 256 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 SUDS3Q9H7L9 328 aaPredicted RBP13.16□□□□□ -0.3
CHGB-201ENST00000378961 CYP26B1Q9NR63 512 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 SMYD2Q9NRG4 433 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 ZNF180Q9UJW8 692 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 DNAJC16Q9Y2G8 782 aa13.16□□□□□ -0.3
CHGB-201ENST00000378961 ITGBL1O95965 494 aaPredicted RBP13.15□□□□□ -0.3
CHGB-201ENST00000378961 COL6A2P12110 1019 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 KCNA4P22459 653 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 MRPS22P82650 360 aaKnown RBP13.15□□□□□ -0.3
CHGB-201ENST00000378961 FSTL1Q12841 308 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 DCTN2Q13561 401 aaKnown RBP13.15□□□□□ -0.3
CHGB-201ENST00000378961 TEX44Q53QW1 395 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 SH2D4BQ5SQS7 431 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 FRMD7Q6ZUT3 714 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 PTAR1Q7Z6K3 402 aaPredicted RBP13.15□□□□□ -0.3
CHGB-201ENST00000378961 CRLF3Q8IUI8 442 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 PPIL6Q8IXY8 311 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 ZNF516Q92618 1163 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 FAM213AQ9BRX8 229 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 CCDC28BQ9BUN5 200 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 FOXP3Q9BZS1 431 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 C17orf75Q9HAS0 396 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 PNPOQ9NVS9 261 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 AGTPBP1Q9UPW5 1226 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 AP4B1Q9Y6B7 739 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 IQANK1A0A1B0GTG1 560 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 CST8O60676 142 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 STBD1O95210 358 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 SUPT20HL2P0C7V6 817 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 ENTPD1P49961 510 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 CNGA3Q16281 694 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 XKR3Q5GH77 459 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 MAVSQ7Z434 540 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 RIOX2Q8IUF8 465 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 RNF169Q8NCN4 708 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 COPS7BQ9H9Q2 264 aaPredicted RBP13.15□□□□□ -0.3
CHGB-201ENST00000378961 IFT122Q9HBG6 1241 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 PCDH9Q9HC56 1237 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 AVENQ9NQS1 362 aaPredicted RBP13.15□□□□□ -0.3
CHGB-201ENST00000378961 ZNF302Q9NR11 478 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 TJP2Q9UDY2 1190 aa13.15□□□□□ -0.3
CHGB-201ENST00000378961 SF3B1O75533 1304 aaKnown RBP eCLIP13.15□□□□□ -0.31
CHGB-201ENST00000378961 SDR42E2A6NKP2 422 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 P4HA2O15460 535 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 TRMUO75648 421 aaKnown RBP13.14□□□□□ -0.31
CHGB-201ENST00000378961 RBP3P10745 1247 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 ITGAXP20702 1163 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 GPC3P51654 580 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 NOMO3P69849 1222 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 LMNB2Q03252 620 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 SLC18A2Q05940 514 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 KYAT3Q6YP21 454 aaKnown RBP13.14□□□□□ -0.31
CHGB-201ENST00000378961 MAP4K3Q8IVH8 894 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 CCDC33Q8N5R6 958 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 ARL10Q8N8L6 244 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 ZBTB8BQ8NAP8 495 aaPredicted RBP13.14□□□□□ -0.31
CHGB-201ENST00000378961 PPP1R14CQ8TAE6 165 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 FEZF2Q8TBJ5 459 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 TMEM174Q8WUU8 243 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 TFB1MQ8WVM0 346 aaKnown RBP13.14□□□□□ -0.31
CHGB-201ENST00000378961 SLC44A1Q8WWI5 657 aa13.14□□□□□ -0.31
CHGB-201ENST00000378961 RSAD2Q8WXG1 361 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms