RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 CFIP05156 583 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 PDGFRBP09619 1106 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 MBL2P11226 248 aaPredicted RBP12.83□□□□□ -0.36
LSM2-208ENST00000375661 ATP1A3P13637 1013 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.36
LSM2-208ENST00000375661 ITPKAP23677 461 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 GNL1P36915 607 aaPredicted RBP12.83□□□□□ -0.36
LSM2-208ENST00000375661 RING1Q06587 406 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 MESP2Q0VG99 397 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 ZNF699Q32M78 642 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 WDR72Q3MJ13 1102 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 VWA3BQ502W6 1294 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 BTBD8Q5XKL5 378 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 KIAA1211LQ6NV74 962 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 ARMCX6Q7L4S7 300 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 LUZP1Q86V48 1076 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 ETFBKMTQ8IXQ9 262 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 FRMD1Q8N878 549 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 LMO3Q8TAP4 145 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 TAF4BQ92750 862 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 MMS19Q96T76 1030 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 SNX25Q9H3E2 840 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 TSPY26PQ9H489 355 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 CAPN10Q9HC96 672 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.83□□□□□ -0.36
LSM2-208ENST00000375661 SMPD4Q9NXE4 827 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 TAB2Q9NYJ8 693 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 NXF1Q9UBU9 619 aaKnown RBP12.83□□□□□ -0.36
LSM2-208ENST00000375661 LIMA1Q9UHB6 759 aaKnown RBP12.83□□□□□ -0.36
LSM2-208ENST00000375661 KLK13Q9UKR3 277 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 STARD13Q9Y3M8 1113 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 MYH10P35580 1976 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 ATRXP46100 2492 aa12.83□□□□□ -0.36
LSM2-208ENST00000375661 GON4LQ3T8J9 2241 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 SPAARA0A1B0GVQ0 90 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 TBC1D3BA6NDS4 549 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 LRRC10BA6NIK2 292 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 BECN2A8MW95 431 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 ZBTB24O43167 697 aaPredicted RBP12.82□□□□□ -0.36
LSM2-208ENST00000375661 ABL1P00519 1130 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 SYPP08247 313 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
LSM2-208ENST00000375661 YWHAQP27348 245 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 TUBP50607 506 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 RPL6Q02878 288 aaKnown RBP12.82□□□□□ -0.36
LSM2-208ENST00000375661 KDSRQ06136 332 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 ZNF33AQ06730 810 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 SLC14A1Q13336 389 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 ZNF667Q5HYK9 610 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 MDH1BQ5I0G3 518 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 LY6G5CQ5SRR4 150 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 EMC10Q5UCC4 262 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 SNX30Q5VWJ9 437 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 SFTPA1Q8IWL2 248 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 NUP93Q8N1F7 819 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 ZNF513Q8N8E2 541 aaPredicted RBP12.82□□□□□ -0.36
LSM2-208ENST00000375661 EHBP1Q8NDI1 1231 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 TATDN2Q93075 761 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 SDCBP2Q9H190 292 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 NDST4Q9H3R1 872 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 DNAAF2Q9NVR5 837 aaKnown RBP12.82□□□□□ -0.36
LSM2-208ENST00000375661 DEC1Q9P2X7 70 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 NME7Q9Y5B8 376 aa12.82□□□□□ -0.36
LSM2-208ENST00000375661 ATXN2Q99700 1313 aaKnown RBP12.82□□□□□ -0.36
LSM2-208ENST00000375661 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 TULP3O75386 442 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 HOXB2P14652 356 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 PTPN1P18031 435 aaKnown RBP12.81□□□□□ -0.36
LSM2-208ENST00000375661 GABRG2P18507 467 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 ASPAP45381 313 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 COPB1P53618 953 aaKnown RBP12.81□□□□□ -0.36
LSM2-208ENST00000375661 CDH8P55286 799 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 TNNC1P63316 161 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 RAB44Q7Z6P3 723 aaPredicted RBP12.81□□□□□ -0.36
LSM2-208ENST00000375661 MINDY1Q8N5J2 469 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 TERB1Q8NA31 727 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 OR6B3Q8NGW1 331 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 FBXO32Q969P5 355 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 ZFRQ96KR1 1074 aaKnown RBP12.81□□□□□ -0.36
LSM2-208ENST00000375661 MRPL45Q9BRJ2 306 aaKnown RBP12.81□□□□□ -0.36
LSM2-208ENST00000375661 CRACR2AQ9BSW2 395 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 GTPBP2Q9BX10 602 aaKnown RBP12.81□□□□□ -0.36
LSM2-208ENST00000375661 VPS16Q9H269 839 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 SMYD3Q9H7B4 428 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 COMMD8Q9NX08 183 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 SUSD2Q9UGT4 822 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 SH3BP1Q9Y3L3 701 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 SPEGQ15772 3267 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 ATP8B3O60423 1300 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 ZZEF1O43149 2961 aa12.81□□□□□ -0.36
LSM2-208ENST00000375661 COCHO43405 550 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
LSM2-208ENST00000375661 NTSR1P30989 418 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 KCNMA1Q12791 1236 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 CETN1Q12798 172 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 LRMPQ12912 555 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 HECTD3Q5T447 861 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 DPY19L2P1Q6NXN4 242 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 SCARA5Q6ZMJ2 495 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 PROSER1Q86XN7 944 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms