RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 EIF3EP60228 445 aaKnown RBP8.21□□□□□ -1.1
USP48-203ENST00000374732 S100A12P80511 92 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 GCKRQ14397 625 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 TIGD6Q17RP2 521 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 TMEM266Q2M3C6 531 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 SGO2Q562F6 1265 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 C15orf52Q6ZUT6 534 aaKnown RBP8.21□□□□□ -1.1
USP48-203ENST00000374732 TREML1Q86YW5 311 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 XXYLT1Q8NBI6 393 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 AKT1S1Q96B36 256 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 ZKSCAN3Q9BRR0 538 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 MTFR1LQ9H019 292 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 C2orf40Q9H1Z8 148 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 GAB2Q9UQC2 676 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 TDRKHQ9Y2W6 561 aaKnown RBP8.21□□□□□ -1.1
USP48-203ENST00000374732 ARFGEF2Q9Y6D5 1785 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 TMEM120BA0PK00 339 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 PRAMEF22A3QJZ6 481 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 USP17L3A6NCW0 530 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 USP17L4A6NCW7 530 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 DCLK1O15075 740 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 RBBP9O75884 186 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 ANP32DO95626 131 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 CHRM3P20309 590 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 GSTT1P30711 240 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 BMI1P35226 326 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 IL15P40933 162 aaPredicted RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 FMR1Q06787 632 aaKnown RBP eCLIP8.2□□□□□ -1.12e-6■■□□□ 12.9
USP48-203ENST00000374732 ZNF252P-AS1Q0IIN9 211 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 MBTPS1Q14703 1052 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 PTPAQ15257 358 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 ZMYND11Q15326 602 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 TARBP2Q15633 366 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 OCLNQ16625 522 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 ARHGAP44Q17R89 818 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 CDKL4Q5MAI5 379 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 C6orf163Q5TEZ5 329 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 RINT1Q6NUQ1 792 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 USP17L2Q6R6M4 530 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 IL27RAQ6UWB1 636 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 UNC13DQ70J99 1090 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 USP17L1Q7RTZ2 530 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 ALLCQ8N6M5 410 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 C7orf31Q8N865 590 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 KCTD4Q8WVF5 259 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 GATAD2BQ8WXI9 593 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 TMA16Q96EY4 203 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 KCNC2Q96PR1 638 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 TRIM2Q9C040 744 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 AP5M1Q9H0R1 490 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 LRRC19Q9H756 370 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 EPB41L5Q9HCM4 733 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 TLR7Q9NYK1 1049 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 SAMD15Q9P1V8 674 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 PCDHGA11Q9Y5H2 935 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 TRPV2Q9Y5S1 764 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 NDUFB9Q9Y6M9 179 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 COMMD3-BMI1R4GMX3 469 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 TRAV20A0A0B4J274 112 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 MEX3AA1L020 520 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 BLACEA4D250 179 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 MAGEA13PA6NCF6 341 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 A6NLC8 198 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 KCNJ18B7U540 433 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 MATN2O00339 956 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 MED24O75448 989 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 HMGN1P05114 100 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 ASGR2P07307 311 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 PRR35P0CG20 571 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 ABCB4P21439 1286 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 DPP6P42658 865 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 USP14P54578 494 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 XIAPP98170 497 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 KCNJ12Q14500 433 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 LLGL1Q15334 1064 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 GNASQ5JWF2 1037 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 YOD1Q5VVQ6 348 aaPredicted RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 WDR93Q6P2C0 686 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 KRT25Q7Z3Z0 450 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 PIWIL3Q7Z3Z3 882 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 KCTD20Q7Z5Y7 419 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 PSTKQ8IV42 348 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 FBXL16Q8N461 479 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 PTCD2Q8WV60 388 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 CELF1Q92879 486 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 KIAA1143Q96AT1 154 aaPredicted RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 REXO5Q96IC2 774 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 TRAPPC9Q96Q05 1148 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 LSG1Q9H089 658 aaKnown RBP8.2□□□□□ -1.1
USP48-203ENST00000374732 ABCG8Q9H221 673 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 KCNF1Q9H3M0 494 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 RUBCNLQ9H714 662 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 DTLQ9NZJ0 730 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 UBN2Q6ZU65 1347 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 PCDH11XQ9BZA7 1347 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 PCDH11YQ9BZA8 1340 aa8.2□□□□□ -1.1
USP48-203ENST00000374732 AFDNP55196 1824 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 BTN3A1O00481 513 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 GPR171O14626 319 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms