RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 WEE2P0C1S8 567 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 CD300CQ08708 224 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 SLC26A11Q86WA9 606 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 KCTD17Q8N5Z5 321 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 CRYGNQ8WXF5 182 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 MTMR4Q9NYA4 1195 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 CNOT11Q9UKZ1 510 aaKnown RBP13.33□□□□□ -0.27
PRPF4-201ENST00000374198 DNAJC16Q9Y2G8 782 aa13.33□□□□□ -0.27
PRPF4-201ENST00000374198 TCRBV7S3A2A0A539 114 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 TISP43B9A030 160 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 UGT1A9O60656 530 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 SNRPAP09012 282 aaKnown RBP13.33□□□□□ -0.28
PRPF4-201ENST00000374198 UGT1A6P19224 532 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 UGT1A1P22309 533 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 UGT1A4P22310 534 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 UGT1A3P35503 534 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 UGT1A5P35504 534 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 SLC16A2P36021 539 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 ELK3P41970 407 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 PPP4CP60510 307 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 CTBSQ01459 385 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 EGFLAMQ63HQ2 1017 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 PDPK2PQ6A1A2 396 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 ARCQ7LC44 396 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 SP8Q8IXZ3 490 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 SENP7Q9BQF6 1050 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 GLT8D2Q9H1C3 349 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 UGT1A7Q9HAW7 530 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 UGT1A10Q9HAW8 530 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 UGT1A8Q9HAW9 530 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 MAN1C1Q9NR34 630 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 GNPTGQ9UJJ9 305 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 PACSIN3Q9UKS6 424 aa13.33□□□□□ -0.28
PRPF4-201ENST00000374198 ZNFX1Q9P2E3 1918 aaKnown RBP13.33□□□□□ -0.28
PRPF4-201ENST00000374198 ZBTB39O15060 712 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 KRT37O76014 449 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 TMEM63AO94886 807 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 KRT1P04264 644 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 PABPC1P11940 636 aaKnown RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 ESRRGP62508 458 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 ANGEL2Q5VTE6 544 aaKnown RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 DPP8Q6V1X1 898 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 CPNE9Q8IYJ1 553 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 MMP19Q99542 508 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 STRA6Q9BX79 667 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 PALMDQ9NP74 551 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 OLAHQ9NV23 265 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 XPO7Q9UIA9 1087 aaKnown RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 ARHGEF37A1IGU5 675 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 FAM86B1E9PN63 330 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 MCF2LO15068 1137 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 KRT38O76015 456 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 LDHBP07195 334 aaKnown RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 FAM86B2P0C5J1 330 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 MYL4P12829 197 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 COX4I1P13073 169 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 KRT5P13647 590 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 ZNF26P17031 533 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 NELFEP18615 380 aaKnown RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 CAMK2BQ13554 666 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 FLOT2Q14254 428 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 ZBED5Q49AG3 693 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 XKR5Q6UX68 686 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 SPOCD1Q6ZMY3 1216 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 RSPH3Q86UC2 560 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 CARM1Q86X55 608 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 TPH2Q8IWU9 490 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 TAB3Q8N5C8 712 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 HM13Q8TCT9 377 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 RMND5BQ96G75 393 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 MKS1Q9NXB0 559 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 NCKIPSDQ9NZQ3 722 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 TAF1P21675 1872 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 TMX2-CTNND1H3BSU7 103 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 MSH4O15457 936 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 LYPLA1O75608 230 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 RFPL1O75677 317 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 ATE1O95260 518 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 CCDC130P13994 396 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 IDH3AP50213 366 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 KPNA1P52294 538 aaPredicted RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 GDF10P55107 478 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 EIF6P56537 245 aaKnown RBP13.32□□□□□ -0.28
PRPF4-201ENST00000374198 MAMLD1Q13495 774 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 RGS21Q2M5E4 152 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 SMUG1Q53HV7 270 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 PLA2G4FQ68DD2 849 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 SPOPLQ6IQ16 392 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 MON1BQ7L1V2 547 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 MIER3Q7Z3K6 550 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 ZSWIM2Q8NEG5 633 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 PPP1R14CQ8TAE6 165 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 SLC35B2Q8TB61 432 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 NSMCE3Q96MG7 304 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 SERPINI1Q99574 410 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 HSD17B14Q9BPX1 270 aa13.32□□□□□ -0.28
PRPF4-201ENST00000374198 CBWD1Q9BRT8 395 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms