RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TJP2Q9UDY2 1190 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 ACOT9Q9Y305 439 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 PLIN4Q96Q06 1357 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 HMOX2P30519 316 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 BBS12Q6ZW61 710 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 POLNQ7Z5Q5 900 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 ZDHHC17Q8IUH5 632 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 ZNF786Q8N393 782 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 CEP41Q9BYV8 373 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 ACKR2O00590 384 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 PSMA4P25789 261 aaKnown RBP17.92■□□□□ 0.46
PTPRU-202ENST00000373779 SHCBP1Q8NEM2 672 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 USP13Q92995 863 aaPredicted RBP17.92■□□□□ 0.46
PTPRU-202ENST00000373779 CPNE1Q99829 537 aa17.92■□□□□ 0.46
PTPRU-202ENST00000373779 PIH1D1Q9NWS0 290 aaKnown RBP17.92■□□□□ 0.46
PTPRU-202ENST00000373779 RRN3P2A6NIE6 340 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 TNPO2O14787 897 aaKnown RBP17.91■□□□□ 0.46
PTPRU-202ENST00000373779 PRPF4O43172 522 aaKnown RBP eCLIP17.91■□□□□ 0.461e-7■■■■■ 27.9
PTPRU-202ENST00000373779 PIAS1O75925 651 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 TGFB2P61812 414 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 NAB1Q13506 487 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 SHROOM1Q2M3G4 852 aaPredicted RBP17.91■□□□□ 0.46
PTPRU-202ENST00000373779 ECHDC2Q86YB7 292 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 LRRC4CQ9HCJ2 640 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 CHST12Q9NRB3 414 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 C5orf60A6NFR6 353 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 E5RJQ4 531 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 NDUFS3O75489 264 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 LYPLA2O95372 231 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 OASLQ15646 514 aaKnown RBP17.91■□□□□ 0.46
PTPRU-202ENST00000373779 SPANXN3Q5MJ09 141 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 C6orf10Q5SRN2 563 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 VSIG10LQ86VR7 867 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 FBXO16Q8IX29 292 aaPredicted RBP17.91■□□□□ 0.46
PTPRU-202ENST00000373779 CORO1CQ9ULV4 474 aaPredicted RBP17.91■□□□□ 0.46
PTPRU-202ENST00000373779 TRIM13O60858 407 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 SUPT7LO94864 414 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 PROCP04070 461 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 KCNT2Q6UVM3 1135 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 FITM2Q8N6M3 262 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 URGCPQ8TCY9 931 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 SNX19Q92543 992 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 EIF2AQ9BY44 585 aaKnown RBP17.91■□□□□ 0.46
PTPRU-202ENST00000373779 NCKIPSDQ9NZQ3 722 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 BLOC1S6Q9UL45 172 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 SORCS3Q9UPU3 1222 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 TPST1O60507 370 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 CSDE1O75534 798 aaKnown RBP17.91■□□□□ 0.46
PTPRU-202ENST00000373779 DGKDQ16760 1214 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 CATSPER2Q96P56 530 aa17.91■□□□□ 0.46
PTPRU-202ENST00000373779 AJAP1Q9UKB5 411 aaPredicted RBP17.91■□□□□ 0.46
PTPRU-202ENST00000373779 LACTBL1A8MY62 500 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 MGRN1O60291 552 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 TBC1D4O60343 1298 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 PGK2P07205 417 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 AMPD1P23109 780 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 NBPF12Q5TAG4 269 aaPredicted RBP17.9■□□□□ 0.46
PTPRU-202ENST00000373779 LLGL2Q6P1M3 1020 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 MFN1Q8IWA4 741 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 ASB7Q9H672 318 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 ASTN2O75129 1339 aaPredicted RBP17.9■□□□□ 0.46
PTPRU-202ENST00000373779 RASSF9O75901 435 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 TGFB3P10600 412 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 SLC6A3Q01959 620 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 PRKAA1Q13131 559 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 LY6KQ17RY6 165 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 GPR141Q7Z602 305 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 PIGWQ7Z7B1 504 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 ADGRF2Q8IZF7 708 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 HELQQ8TDG4 1101 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 DCXO43602 365 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 AP1G2O75843 785 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 TRUB2O95900 331 aaKnown RBP17.9■□□□□ 0.46
PTPRU-202ENST00000373779 BST1Q10588 318 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 R3HDM1Q15032 1099 aaKnown RBP17.9■□□□□ 0.46
PTPRU-202ENST00000373779 C16orf46Q6P387 395 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 SCUBE3Q8IX30 993 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 PYDC1Q8WXC3 89 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 TRAPPC9Q96Q05 1148 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 PCDHA2Q9Y5H9 948 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 FAM58BPP0C7Q3 252 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 CDK7P50613 346 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.9■□□□□ 0.46
PTPRU-202ENST00000373779 CYP4F12Q9HCS2 524 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 MROH7Q68CQ1 1323 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 A0A096LPK6 155 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 IGKV6D-41A0A0C4DH26 115 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 MAGEB16A2A368 324 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 MTA2O94776 668 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 TM4SF1P30408 202 aa17.9■□□□□ 0.46
PTPRU-202ENST00000373779 PIWIL2Q8TC59 973 aaKnown RBP17.9■□□□□ 0.46
PTPRU-202ENST00000373779 ASCC2Q9H1I8 757 aaPredicted RBP17.9■□□□□ 0.46
PTPRU-202ENST00000373779 HACD1B0YJ81 288 aa17.89■□□□□ 0.46
PTPRU-202ENST00000373779 RNF103O00237 685 aa17.89■□□□□ 0.46
PTPRU-202ENST00000373779 F9P00740 461 aa17.89■□□□□ 0.46
PTPRU-202ENST00000373779 SERPINB10P48595 397 aa17.89■□□□□ 0.46
PTPRU-202ENST00000373779 ACVR2BQ13705 512 aa17.89■□□□□ 0.46
PTPRU-202ENST00000373779 LBRQ14739 615 aaKnown RBP17.89■□□□□ 0.46
PTPRU-202ENST00000373779 EFL1Q7Z2Z2 1120 aaKnown RBP17.89■□□□□ 0.46
PTPRU-202ENST00000373779 OR5B17Q8NGF7 314 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms