RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 STON2Q8WXE9 905 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 BRI3BPQ8WY22 251 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 POMGNT1Q8WZA1 660 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 AGO4Q9HCK5 861 aaKnown RBP11.02□□□□□ -0.64
CAPN3-205ENST00000357568 CDH22Q9UJ99 828 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 FEM1BQ9UK73 627 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 PCDHB4Q9Y5E5 795 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 NR2E3Q9Y5X4 410 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 STYXL1Q9Y6J8 313 aa11.02□□□□□ -0.64
CAPN3-205ENST00000357568 A0A0J9YVX5 310 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 KBTBD13C9JR72 458 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 RFPL1O75677 317 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 ALDH1A1P00352 501 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 PEX2P28328 305 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 USP4Q13107 963 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 DPYSL3Q14195 570 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 HADHQ16836 314 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 ZFYVE27Q5T4F4 411 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 FAM160B2Q86V87 743 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 XAB2Q9HCS7 855 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 KMT5AQ9NQR1 393 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 KLHL11Q9NVR0 708 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 PRPF19Q9UMS4 504 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 CHMP2BQ9UQN3 213 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 UBIAD1Q9Y5Z9 338 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 ARHGAP42A6NI28 874 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 H0YJX3 145 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 H3BNX3 289 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 C6orf222P0C671 652 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 ALDH18A1P54886 795 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 NR1H2P55055 460 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 RPL7AP62424 266 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 SLC25A11Q02978 314 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 GAD2Q05329 585 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 ACAP1Q15027 740 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 TRIP10Q15642 601 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 KLHDC10Q6PID8 442 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 SLC30A10Q6XR72 485 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 RBM44Q6ZP01 1051 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 CATSPERGQ6ZRH7 1159 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 CDHR3Q6ZTQ4 885 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 RFX8Q6ZV50 586 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 FBXW8Q8N3Y1 598 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 TMEM35BQ8NCS4 154 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 ADCY4Q8NFM4 1077 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 PIWIL2Q8TC59 973 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 SLC26A7Q8TE54 656 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 ZNF516Q92618 1163 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 RTP4Q96DX8 246 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 RILPQ96NA2 401 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 PI4K2AQ9BTU6 479 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 KCNH7Q9NS40 1196 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 VPS28Q9UK41 221 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 CNOT11Q9UKZ1 510 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 APOBEC2Q9Y235 224 aaKnown RBP11.02□□□□□ -0.65
CAPN3-205ENST00000357568 POMPQ9Y244 141 aa11.02□□□□□ -0.65
CAPN3-205ENST00000357568 A0A0G2JMZ2 1700 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 MCF2LO15068 1137 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 HNRNPRO43390 633 aaKnown RBP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 IDO1P14902 403 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 ITGB5P18084 799 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 EIF4BP23588 611 aaKnown RBP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 GDF10P55107 478 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 MTTPP55157 894 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 FBXL19Q6PCT2 694 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 DCUN1D2Q6PH85 259 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 DHRS4L2Q6PKH6 230 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 ZNF554Q86TJ5 538 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 IFNL1Q8IU54 200 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 PQLC1Q8N2U9 271 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 GAB3Q8WWW8 586 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 PYDC1Q8WXC3 89 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 RSPH1Q8WYR4 309 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 NMD3Q96D46 503 aaKnown RBP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 CCDC97Q96F63 343 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 BIRC8Q96P09 236 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 RPAP3Q9H6T3 665 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 MAP3K20Q9NYL2 800 aaKnown RBP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 CLIC5Q9NZA1 410 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 ARHGAP28Q9P2N2 729 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 PCDHGC3Q9UN70 934 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 F8VP50 259 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 CDK4P11802 303 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 TCF4P15884 667 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 RAG1P15918 1043 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 KDELR1P24390 212 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 GRK2P25098 689 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 GABRB2P47870 512 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 ALDH1A3P47895 512 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 ACADVLP49748 655 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 AP3M2P53677 418 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 YWHAGP61981 247 aaKnown RBP eCLIP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 KRT81Q14533 505 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 ZYXQ15942 572 aaKnown RBP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 RARS2Q5T160 578 aaKnown RBP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 FAM102BQ5T8I3 360 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 TDRD10Q5VZ19 366 aaKnown RBP11.01□□□□□ -0.65
CAPN3-205ENST00000357568 LPCAT4Q643R3 524 aa11.01□□□□□ -0.65
CAPN3-205ENST00000357568 LBX2Q6XYB7 198 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms