RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CACTIN-AS1Q8N1I8 211 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 SLC20A1Q8WUM9 679 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 TRUB1Q8WWH5 349 aaKnown RBP9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 GJA10Q969M2 543 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 CCDC120Q96HB5 630 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 MARK4Q96L34 752 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 PSD2Q9BQI7 771 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 C20orf27Q9GZN8 174 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 GPR108Q9NPR9 543 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 ANGPTL3Q9Y5C1 460 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 FRMPD4Q14CM0 1322 aa9.96□□□□□ -0.81
PTCHD4-201ENST00000339488 CCDC194A0A1B0GVG4 234 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 EYA2O00167 538 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 LPXNO60711 386 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 GAS7O60861 476 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 KLHL2O95198 593 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 ITGAXP20702 1163 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 PKNOX1P55347 436 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 MAP3K7CLP57077 242 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 RAB39AQ14964 217 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 NFE2Q16621 373 aaPredicted RBP9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 LETM2Q2VYF4 491 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 AKAP4Q5JQC9 854 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 ZCCHC8Q6NZY4 707 aaKnown RBP9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 ZNF530Q6P9A1 599 aaPredicted RBP9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC22A16Q86VW1 577 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 FAM156AQ8NDB6 213 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 USP13Q92995 863 aaPredicted RBP9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 MAGED4Q96JG8 741 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 ZFYVE19Q96K21 471 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 STRBPQ96SI9 672 aaKnown RBP9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 APOL6Q9BWW8 343 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 EMILIN2Q9BXX0 1053 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 ITM2CQ9NQX7 267 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 KCNN3Q9UGI6 736 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 PCDHGA7Q9Y5G6 932 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC30A1Q9Y6M5 507 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 NCANO14594 1321 aa9.96□□□□□ -0.82
PTCHD4-201ENST00000339488 SYCE1LA8MT33 242 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 RGS13O14921 159 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 ARHGEF15O94989 841 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 TMEM253P0C7T8 217 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 TGFB3P10600 412 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 IFI30P13284 250 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 ATF4P18848 351 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 SSTR1P30872 391 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 ATICP31939 592 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 IL15P40933 162 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 RPL26P61254 145 aaKnown RBP9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 FOXO4P98177 505 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 BST1Q10588 318 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 NFATC3Q12968 1075 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 SNTA1Q13424 505 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 EPHA7Q15375 998 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 CCNG2Q16589 344 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 ZBED5Q49AG3 693 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 FRMD7Q6ZUT3 714 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 SV2BQ7L1I2 683 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 CATSPER1Q8NEC5 780 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 OR2T3Q8NH03 318 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 CNTNAP5Q8WYK1 1306 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 KAT6AQ92794 2004 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 CLSTN3Q9BQT9 956 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 IKZF4Q9H2S9 585 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 TOR3AQ9H497 397 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 COQ10BQ9H8M1 238 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 POLR1BQ9H9Y6 1135 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 MAGEE1Q9HCI5 957 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 BLOC1S4Q9NUP1 217 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 GCNT4Q9P109 453 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 CDH7Q9ULB5 785 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 TNS3Q68CZ2 1445 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 ATP6V1G2-DDX39BF2Z307 99 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 NADKO95544 446 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 GRIA1P42261 906 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 COPAP53621 1224 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 TMPRSS15P98073 1019 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 DSC3Q14574 896 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 BOLA3Q53S33 107 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 RSBN1Q5VWQ0 802 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 TNIP2Q8NFZ5 429 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 JADE3Q92613 823 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 DMRTB1Q96MA1 342 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 MTG1Q9BT17 334 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 PCDHA12Q9UN75 941 aa9.95□□□□□ -0.82
PTCHD4-201ENST00000339488 MYO3BQ8WXR4 1341 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 SEMA3DO95025 777 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 PCP11498 1178 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 PCNAP12004 261 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 XRCC1P18887 633 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 DSTNP60981 165 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 DLG4P78352 724 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 GPLD1P80108 840 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 FPGSQ05932 587 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 FAM47CQ5HY64 1035 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 PGM2L1Q6PCE3 622 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 ANKRD13DQ6ZTN6 518 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 CDHR3Q6ZTQ4 885 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 GATAD2AQ86YP4 633 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms