RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 UBQLN1Q9UMX0 589 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 NR2E3Q9Y5X4 410 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 A0A1B0GVG6 124 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 FCHO1O14526 889 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 PDE5AO76074 875 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 PGM3O95394 542 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 PSMG1O95456 288 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 CD4P01730 458 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 HNRNPCP07910 306 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 TCN1P20061 433 aaPredicted RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 AVPR1AP37288 418 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 TKTL1P51854 596 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 MARSP56192 900 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 JAM2P57087 298 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 MGAT5Q09328 741 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 GRIK3Q13003 919 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 CYTH1Q15438 398 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 TAF5Q15542 800 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ZC3H12AQ5D1E8 599 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF484Q5JVG2 852 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 GLB1LQ6UWU2 654 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ARHGAP22Q7Z5H3 698 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 CDKL3Q8IVW4 592 aaPredicted RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 GALNT4Q8N4A0 578 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 GLT1D1Q96MS3 346 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 PAFAH2Q99487 392 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 EPAS1Q99814 870 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 BTBD10Q9BSF8 475 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 SYT17Q9BSW7 474 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 NXF3Q9H4D5 531 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 SP110Q9HB58 689 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ZFYVE28Q9HCC9 887 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 TRPC7Q9HCX4 862 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 KRT82Q9NSB4 513 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 DDX43Q9NXZ2 648 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 SLC17A7Q9P2U7 560 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 SLC39A10Q9ULF5 831 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 AP4E1Q9UPM8 1137 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 APOBEC2Q9Y235 224 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 PCDHA2Q9Y5H9 948 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 NCANO14594 1321 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 SOWAHBA6NEL2 793 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 GMNNO75496 209 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 DGKIO75912 1065 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 HMGCRP04035 888 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 PYGBP11216 843 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 EIF4BP23588 611 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 DNAJB2P25686 324 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 RBL1P28749 1068 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 POU5F1Q01860 360 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 DYNC1I2Q13409 638 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 CCNG2Q16589 344 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ZPBP2Q6X784 338 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 PPIL6Q8IXY8 311 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 TMEM130Q8N3G9 435 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 EXD1Q8NHP7 514 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ACO2Q99798 780 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 TINF2Q9BSI4 451 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 CNPY3Q9BT09 278 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 C20orf96Q9NUD7 363 aaPredicted RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 TJP2Q9UDY2 1190 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 AFF4Q9UHB7 1163 aaKnown RBP6.69□□□□□ -1.34
HMG20A-201ENST00000336216 CCDC88AQ3V6T2 1871 aa6.69□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF536O15090 1300 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 GPR25O00155 361 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 DHX15O43143 795 aaKnown RBP6.68□□□□□ -1.34
HMG20A-201ENST00000336216 NPM3O75607 178 aaKnown RBP6.68□□□□□ -1.34
HMG20A-201ENST00000336216 THP07101 528 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 ACADSP16219 412 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 CSE1LP55060 971 aaKnown RBP6.68□□□□□ -1.34
HMG20A-201ENST00000336216 IL1RL1Q01638 556 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 CHI3L2Q15782 390 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 WASHC2DQ5SRD0 308 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 SDHAF4Q5VUM1 108 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 WSCD1Q658N2 575 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 ATG16L1Q676U5 607 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 CWF19L1Q69YN2 538 aaKnown RBP6.68□□□□□ -1.34
HMG20A-201ENST00000336216 IYDQ6PHW0 289 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 DEFB128Q7Z7B8 93 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 ALYREFQ86V81 257 aaKnown RBP6.68□□□□□ -1.34
HMG20A-201ENST00000336216 MFN1Q8IWA4 741 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 DEFB106AQ8N104 65 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 BBS5Q8N3I7 341 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 PLEKHO2Q8TD55 490 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 HELQQ8TDG4 1101 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 ERLEC1Q96DZ1 483 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 IFT43Q96FT9 208 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 VPS39Q96JC1 886 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 TXNRD2Q9NNW7 524 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 BARX2Q9UMQ3 279 aaPredicted RBP6.68□□□□□ -1.34
HMG20A-201ENST00000336216 A0A0B4J269 797 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 RRN3P2A6NIE6 340 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 C3orf70A6NLC5 250 aaPredicted RBP6.68□□□□□ -1.34
HMG20A-201ENST00000336216 KPNA7A9QM74 516 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 EDF1O60869 148 aaKnown RBP6.68□□□□□ -1.34
HMG20A-201ENST00000336216 USP17L7P0C7H9 530 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 BDNFP23560 247 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 MLH1P40692 756 aa6.68□□□□□ -1.34
HMG20A-201ENST00000336216 OAZ1P54368 228 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms