RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 ARMC6Q6NXE6 501 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 BHLHE22Q8NFJ8 381 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ZNF75CPQ92670 426 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 KLHL32Q96NJ5 620 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 MRPL39Q9NYK5 338 aaKnown RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 RIMBP3CA6NJZ7 1639 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 RIMBP3BA6NNM3 1639 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 RIMBP3Q9UFD9 1639 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 FAM92AA1XBS5 289 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 DDX3XO00571 662 aaKnown RBP eCLIP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 NOS1APO75052 506 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 GTF2H3Q13889 308 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 PDIA5Q14554 519 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 PHKG1Q16816 387 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CNPY1Q3B7I2 92 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 RNF135Q8IUD6 432 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 C8orf59Q8N0T1 100 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ELMO2Q96JJ3 720 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 TMEM117Q9H0C3 514 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SLC12A4Q9UP95 1085 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SPEF1Q9Y4P9 236 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 DUSP10Q9Y6W6 482 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ARPC4-TTLL3A0A0A6YYG9 625 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ERVV-1B6SEH8 477 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 NPR3P17342 541 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 LGALS3BPQ08380 585 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ALX1Q15699 326 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 C5orf22Q49AR2 442 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CENPLQ8N0S6 344 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 AHI1Q8N157 1196 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 USP13Q92995 863 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CCDC126Q96EE4 140 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 TFR2Q9UP52 801 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 MAPRE3Q9UPY8 281 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SPTAN1Q13813 2472 aaKnown RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 HEG1Q9ULI3 1381 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 RALAP11233 206 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ADSSP30520 456 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 PSEN1P49768 467 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SPIRE1Q08AE8 756 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SLC10A5Q5PT55 438 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 FAM102AQ5T9C2 384 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 EGFLAMQ63HQ2 1017 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 PADI6Q6TGC4 694 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 JCADQ9P266 1359 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 TADA2AO75478 443 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 LYNP07948 512 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 HK2P52789 917 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 MRPS22P82650 360 aaKnown RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 USP10Q14694 798 aaKnown RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SMAD1Q15797 465 aaKnown RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ZNF57Q68EA5 555 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 DENND5AQ6IQ26 1287 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SDE2Q6IQ49 451 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 RRM2BQ7LG56 351 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 TBCCD1Q9NVR7 557 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 NOTOA8MTQ0 251 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CYP26A1O43174 497 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 C6orf222P0C671 652 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 MMP13P45452 471 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 IST1P53990 364 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 TOP3AQ13472 1001 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 HLFQ16534 295 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 AAGABQ6PD74 315 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 POTEGQ6S5H5 508 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CREG2Q8IUH2 290 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CCNJLQ8IV13 435 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 MCEEQ96PE7 176 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 POLR3FQ9H1D9 316 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SEMA4AQ9H3S1 761 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 PIH1D3Q9NQM4 214 aaKnown RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 RAB6BQ9NRW1 208 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 VTI1BQ9UEU0 232 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 FBXO40Q9UH90 709 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ZNRF3Q9ULT6 936 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 PCDHB7Q9Y5E2 793 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 AP4B1Q9Y6B7 739 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CAMSAP1Q5T5Y3 1602 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SUPT3HB4E1H0 165 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 GNB5O14775 395 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 UBDO15205 165 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CCNKO75909 580 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 RARBP10826 455 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ACAT1P24752 427 aaKnown RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 IL5RAQ01344 420 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 TNFAIP2Q03169 654 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CACHD1Q5VU97 1274 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 FAM71DQ8N9W8 422 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 OR6P1Q8NGX9 317 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 SGF29Q96ES7 293 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 COPS7BQ9H9Q2 264 aaPredicted RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 POLR1BQ9H9Y6 1135 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ATPIF1Q9UII2 106 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 NAGPAQ9UK23 515 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 MTRF1O75570 445 aaKnown RBP5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CPB1P15086 417 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ACLYP53396 1101 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 AP3M2P53677 418 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 CKAP2Q8WWK9 683 aa5.52□□□□□ -1.53
SDR42E1-201ENST00000328945 ROGDIQ9GZN7 287 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms