RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 LZTS1Q9Y250 596 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 PSMB4P28070 264 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 PKNOX1P55347 436 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 NBPF20Q3BBV1 942 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 ZNF484Q5JVG2 852 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 SNX30Q5VWJ9 437 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 RNF219Q5W0B1 726 aaPredicted RBP16.97■□□□□ 0.31
CLIP4-201ENST00000320081 CXCL17Q6UXB2 119 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 CATSPERGQ6ZRH7 1159 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 PYDC1Q8WXC3 89 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 SLC24A2Q9UI40 661 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 CDYLQ9Y232 598 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 CDY2AQ9Y6F7 541 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 CDY1Q9Y6F8 540 aa16.97■□□□□ 0.31
CLIP4-201ENST00000320081 APOC4-APOC2K7ER74 178 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 APOC2P02655 101 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 TGFB3P10600 412 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 DNAJB2P25686 324 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 TGFB2P61812 414 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 ZSCAN18Q8TBC5 510 aaPredicted RBP16.96■□□□□ 0.31
CLIP4-201ENST00000320081 KCNK16Q96T55 309 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 SIX2Q9NPC8 291 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 PLA2G4CQ9UP65 541 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 C17orf102A2RUQ5 167 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 PARNO95453 639 aaKnown RBP16.96■□□□□ 0.31
CLIP4-201ENST00000320081 PROCP04070 461 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 F7P08709 466 aaPredicted RBP16.96■□□□□ 0.31
CLIP4-201ENST00000320081 EIF4BP23588 611 aaKnown RBP16.96■□□□□ 0.31
CLIP4-201ENST00000320081 BST2Q10589 180 aaKnown RBP16.96■□□□□ 0.31
CLIP4-201ENST00000320081 PDK2Q15119 407 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 KYAT1Q16773 422 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 UGP2Q16851 508 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 C18orf25Q96B23 403 aaPredicted RBP16.96■□□□□ 0.31
CLIP4-201ENST00000320081 SYT15Q9BQS2 421 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 TSPYL2Q9H2G4 693 aaPredicted RBP16.96■□□□□ 0.31
CLIP4-201ENST00000320081 CD274Q9NZQ7 290 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 CACNG4Q9UBN1 327 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 SNX13Q9Y5W8 968 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 A0A096LPK6 155 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 CES2O00748 559 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 FSCN2O14926 492 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 GAS2O43903 313 aaKnown RBP16.96■□□□□ 0.31
CLIP4-201ENST00000320081 KLHL2O95198 593 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 KRT16P08779 473 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 TCF4P15884 667 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 GOT1P17174 413 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 VHLP40337 213 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 TTC30AQ86WT1 665 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 CKAP2Q8WWK9 683 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 OMDQ99983 421 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 FAM96AQ9H5X1 160 aa16.96■□□□□ 0.31
CLIP4-201ENST00000320081 ADARB2Q9NS39 739 aaKnown RBP16.96■□□□□ 0.31
CLIP4-201ENST00000320081 RHOBTB1O94844 696 aa16.96■□□□□ 0.3
CLIP4-201ENST00000320081 SLC25A3Q00325 362 aa16.96■□□□□ 0.3
CLIP4-201ENST00000320081 ZNF268Q14587 947 aaPredicted RBP16.96■□□□□ 0.3
CLIP4-201ENST00000320081 GALNTL6Q49A17 601 aa16.96■□□□□ 0.3
CLIP4-201ENST00000320081 CYP2R1Q6VVX0 501 aa16.96■□□□□ 0.3
CLIP4-201ENST00000320081 SUGP1Q8IWZ8 645 aaKnown RBP16.96■□□□□ 0.3
CLIP4-201ENST00000320081 SAMD3Q8N6K7 520 aa16.96■□□□□ 0.3
CLIP4-201ENST00000320081 LRRC19Q9H756 370 aa16.96■□□□□ 0.3
CLIP4-201ENST00000320081 LRRC40Q9H9A6 602 aa16.96■□□□□ 0.3
CLIP4-201ENST00000320081 LRRC4CQ9HCJ2 640 aa16.96■□□□□ 0.3
CLIP4-201ENST00000320081 MAP3K20Q9NYL2 800 aaKnown RBP16.96■□□□□ 0.3
CLIP4-201ENST00000320081 SLC30A1Q9Y6M5 507 aa16.96■□□□□ 0.3
CLIP4-201ENST00000320081 SYCE1LA8MT33 242 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 PGK1P00558 417 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 HMOX2P30519 316 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 CCR1P32246 355 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 LRRC23Q53EV4 343 aaPredicted RBP16.95■□□□□ 0.3
CLIP4-201ENST00000320081 NIPA1Q7RTP0 329 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 CMC1Q7Z7K0 106 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 PIGZQ86VD9 579 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 PRDM12Q9H4Q4 367 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 LTN1O94822 1766 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 RBAK-RBAKDNI3L0D1 243 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 PRRG1O14668 218 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 KIF1CO43896 1103 aaKnown RBP16.95■□□□□ 0.3
CLIP4-201ENST00000320081 GLRA3O75311 464 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 PAX7P23759 505 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 PTPN4P29074 926 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 NAGLUP54802 743 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 MARSP56192 900 aaKnown RBP16.95■□□□□ 0.3
CLIP4-201ENST00000320081 PLOD1Q02809 727 aaPredicted RBP16.95■□□□□ 0.3
CLIP4-201ENST00000320081 PLEKHH3Q7Z736 793 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 MREGQ8N565 214 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 LENG1Q96BZ8 264 aaPredicted RBP16.95■□□□□ 0.3
CLIP4-201ENST00000320081 DDX50Q9BQ39 737 aaKnown RBP16.95■□□□□ 0.3
CLIP4-201ENST00000320081 TBC1D10AQ9BXI6 508 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 RUBCNLQ9H714 662 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 DONSONQ9NYP3 566 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 CRYL1Q9Y2S2 319 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 NCANO14594 1321 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 PEX1O43933 1283 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 LGR5O75473 907 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 ESRRBO95718 433 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 ARF4P18085 180 aaPredicted RBP16.95■□□□□ 0.3
CLIP4-201ENST00000320081 NFKBIAP25963 317 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 WEE1P30291 646 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 SCNN1BP51168 640 aa16.95■□□□□ 0.3
CLIP4-201ENST00000320081 ZNF662Q6ZS27 426 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms