RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 ALDH1A3P47895 512 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 BCAT1P54687 386 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 DPYSL3Q14195 570 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 SMIM5Q71RC9 77 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 FAM9CQ8IZT9 166 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 EPS8L1Q8TE68 723 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 PLEKHA8Q96JA3 519 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 GPAMQ9HCL2 828 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 TAS2R14Q9NYV8 317 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 CNTNAP4Q9C0A0 1308 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 WDR27A2RRH5 827 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 RGS5O15539 181 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 KRT36O76013 467 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 ANPEPP15144 967 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 EIF2B2P49770 351 aaKnown RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 ACAP1Q15027 740 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 ZRANB3Q5FWF4 1079 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 NOTUMQ6P988 496 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 FASTKD5Q7L8L6 764 aaKnown RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 OTOP1Q7RTM1 612 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 CCDC33Q8N5R6 958 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 FOPNLQ96NB1 174 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 C9orf16Q9BUW7 83 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 APOL5Q9BWW9 433 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 COPS7BQ9H9Q2 264 aaPredicted RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 COMMD8Q9NX08 183 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 RBAK-RBAKDNI3L0D1 243 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 CYTH3O43739 400 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 NR2C2P49116 596 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 CSHL1Q14406 222 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 GALNTL6Q49A17 601 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 SYTL3Q4VX76 610 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 ARMCX4Q5H9R4 360 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 SPIRE2Q8WWL2 714 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 PPP1R10Q96QC0 940 aaKnown RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 ITGB1BP2Q9UKP3 347 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 DIP2CQ9Y2E4 1556 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 IQCA1LA6NCM1 817 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 NPTXRO95502 500 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 TTKP33981 857 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 FASTKQ14296 549 aaKnown RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 SAMD4BQ5PRF9 694 aaKnown RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 DHDDSQ86SQ9 333 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 ZCCHC7Q8N3Z6 543 aaKnown RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 PIWIL2Q8TC59 973 aaKnown RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 ATAD3AQ9NVI7 634 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 SYNDIG1LA6NDD5 238 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 ATXN8OSP0DMR3 200 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 RARRES1P49788 294 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 FAM98BQ52LJ0 330 aaKnown RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 GLRA4Q5JXX5 417 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 ZCCHC23Q6ZST2 131 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 MRPS26Q9BYN8 205 aaKnown RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 STMN3Q9NZ72 180 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 H2AFY2Q9P0M6 372 aaPredicted RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 PCDHB8Q9UN66 801 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 A0A096LPK6 155 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 FAM237BA0A1B0GVD1 139 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 FAM86B1E9PN63 330 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 C2CD2LO14523 706 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 TRIM24O15164 1050 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 FAM86B2P0C5J1 330 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 TPBGLP0DKB5 382 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 PDK3Q15120 406 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 IL17AQ16552 155 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 CCDC142Q17RM4 750 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 CEP78Q5JTW2 689 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 RIPOR1Q6ZS17 1223 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 OTOAQ7RTW8 1153 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 ATG4CQ96DT6 458 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 GGA3Q9NZ52 723 aa13.19□□□□□ -0.3
COL3A1-201ENST00000304636 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
COL3A1-201ENST00000304636 MRASO14807 208 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 VPS26AO75436 327 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 GSNP06396 782 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 ETFBP38117 255 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 RPL5P46777 297 aaKnown RBP13.18□□□□□ -0.3
COL3A1-201ENST00000304636 MAP3K7CLP57077 242 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 INTS5Q6P9B9 1019 aaKnown RBP13.18□□□□□ -0.3
COL3A1-201ENST00000304636 ELMOD1Q8N336 334 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 WDR60Q8WVS4 1066 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 SYTL2Q9HCH5 934 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 WWOXQ9NZC7 414 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 CFAP99D6REC4 459 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 LDLRP01130 860 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 AARS2Q5JTZ9 985 aaKnown RBP13.18□□□□□ -0.3
COL3A1-201ENST00000304636 ANKS3Q6ZW76 656 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 ZFYVE19Q96K21 471 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 FBXO28Q9NVF7 368 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 SLC2A3P11169 496 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 MYL4P12829 197 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms