RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 HOXC11O43248 304 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 KRT38O76015 456 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 URI1O94763 535 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 HEXIM1O94992 359 aaKnown RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 TFRCP02786 760 aaKnown RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 CREB1P16220 341 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 RXRAP19793 462 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 TGM1P22735 817 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 THBS4P35443 961 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 LIFRP42702 1097 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 MCM2P49736 904 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 DIO1P49895 249 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 PSG6Q00889 435 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 TLE2Q04725 743 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 SEMA3BQ13214 749 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 PDCLQ13371 301 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 BFSP2Q13515 415 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 DNASE1L3Q13609 305 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 SIM2Q14190 667 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 RPS6KA2Q15349 733 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 AAK1Q2M2I8 961 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 SLC4A8Q2Y0W8 1093 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 SPATS1Q496A3 300 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 MAP3K21Q5TCX8 1036 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 Q6YL49 198 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 PTCHD4Q6ZW05 846 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 BBS12Q6ZW61 710 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 ZNF551Q7Z340 670 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 KRT27Q7Z3Y8 459 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 PEG10Q86TG7 708 aaKnown RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 P3H2Q8IVL5 708 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 TMEM57Q8N5G2 664 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 RP9Q8TA86 221 aaKnown RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 SLC2A12Q8TD20 617 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 LINC00476Q8WZB0 136 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 PRR11Q96HE9 360 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 DPCDQ9BVM2 203 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 CCDC134Q9H6E4 229 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 SAP30LQ9HAJ7 183 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 DUSP22Q9NRW4 184 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 LIN7CQ9NUP9 197 aaKnown RBP4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 FBXO28Q9NVF7 368 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 DLL3Q9NYJ7 618 aa4.91□□□□□ -1.62
HMGB1P5-201ENST00000255320 CCDC187A0A096LP49 1063 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 GRID2IPA4D2P6 1211 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 H0YIZ8 118 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 AP4M1O00189 453 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 TMPRSS11DO60235 418 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 MBPP02686 304 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 CNPP09543 421 aaKnown RBP4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 ELFN1P0C7U0 828 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 PDE1AP54750 535 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 SUMO2P61956 95 aaKnown RBP4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 UBE3AQ05086 875 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 FAM187BQ17R55 369 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 SPRED1Q7Z699 444 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 HEATR4Q86WZ0 1026 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 PNPLA1Q8N8W4 532 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 SH3RF3Q8TEJ3 882 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 KTI12Q96EK9 354 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 VPS50Q96JG6 964 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 MAELQ96JY0 434 aaKnown RBP4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 LENG8Q96PV6 779 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 EIF3CQ99613 913 aaKnown RBP4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 FSD1LQ9BXM9 530 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 ARHGAP39Q9C0H5 1083 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 CHODLQ9H9P2 273 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 UBN1Q9NPG3 1134 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 ARHGEF3Q9NR81 526 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 SERTAD4Q9NUC0 356 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 RCE1Q9Y256 329 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 DNAJC16Q9Y2G8 782 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 DERAQ9Y315 318 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 REXO2Q9Y3B8 237 aaKnown RBP4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 PCDHB2Q9Y5E7 798 aa4.9□□□□□ -1.63
HMGB1P5-201ENST00000255320 MBD3L5A6NJ08 208 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 LINC00473A8K010 186 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 STX16-NPEPL1H3BU86 382 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 STX16O14662 325 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 NKX2-8O15522 239 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 PRAMEF2O60811 474 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 RHOBTB3O94955 611 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 ENGP17813 658 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 FPR3P25089 353 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 TUBP50607 506 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 RPL15P61313 204 aaKnown RBP4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 RAE1P78406 368 aaKnown RBP4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 CHRNDQ07001 517 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 LMAN2Q12907 356 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 SLC12A1Q13621 1099 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 DCTN1Q14203 1278 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 LSM12Q3MHD2 195 aaKnown RBP4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 KAZNQ674X7 775 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 ANKRD40Q6AI12 368 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 IGFL4Q6B9Z1 124 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 ACSM6Q6P461 480 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 RINLQ6ZS11 566 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 RASGRP2Q7LDG7 609 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 SIRT6Q8N6T7 355 aa4.89□□□□□ -1.63
HMGB1P5-201ENST00000255320 HTRA1Q92743 480 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms