RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Cacna2d4Q5RJF7 1116 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ctc1Q5SUQ9 1212 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Pwwp2aQ69Z61 730 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Cdc14aQ6GQT0 603 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Krt42Q6IFX2 452 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Tnpo3Q6P2B1 923 aaKnown RBP7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Scaf4Q6PFF0 1209 aaKnown RBP7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Nucks1Q80XU3 234 aaKnown RBP7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Gtf2a2Q80ZM7 109 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ccdc181Q80ZU5 509 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ublcp1Q8BGR9 318 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 E330017A01RikQ8BU47 192 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Fsd1lQ8BYN5 507 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ttc16Q8C1F5 767 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Apol9bQ8C7I4 310 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Mfsd14bQ8CIA9 507 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Appl2Q8K3G9 662 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Defb15Q8R2I5 79 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Abhd4Q8VD66 342 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Apol9aQ8VDU3 310 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Mtmr14Q8VEL2 648 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Slc12a8Q8VI23 705 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Slc25a38Q91XD8 326 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Med15Q924H2 789 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Slc12a6Q924N4 1150 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Grk2Q99MK8 689 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ndufab1Q9CR21 156 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ctnnbl1Q9CWL8 563 aaKnown RBP7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 3830403N18RikQ9D6C3 208 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ccdc91Q9D8L5 442 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Rnf6Q9DBU5 667 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Actn2Q9JI91 894 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Rilpl1Q9JJC6 406 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Tlr2Q9QUN7 784 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 GgcxQ9QYC7 757 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Robo3Q9Z2I4 1366 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Malrd1A2AJX4 2123 aa7.54□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Tnrc18Q80WC3 2878 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Adamts9E9PUN6 1931 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Lrrc74aA0A1Y7VMD6 494 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Zfp266E9Q2S7 604 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 C2cd2E9Q3C1 696 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Mroh9G5E8L9 891 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Xbp1O35426 267 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Copb2O55029 905 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Nmt1O70310 496 aaKnown RBP7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Pdk4O70571 412 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Syn1O88935 706 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Calb1P12658 261 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Glud1P26443 558 aaKnown RBP7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ctnnd1P30999 938 aaKnown RBP7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Hoxa11P31311 313 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Scarf2P59222 833 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Myo1fP70248 1099 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Muc1Q02496 630 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Gdpd4Q3TT99 632 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Dcaf17Q3TUL7 519 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Dhrs11Q3U0B3 260 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ube2zQ3UE37 356 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Tspyl3Q3UYP3 334 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Sfi1Q3UZY0 1216 aaKnown RBP7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ndufaf2Q59J78 168 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Atp13a3Q5XF89 1219 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Gas7Q60780 421 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ppp1r13bQ62415 1087 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Tsga10Q6NY15 697 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Inpp4bQ6P1Y8 924 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Tbc1d22bQ80VE5 505 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Usp6nlQ80XC3 819 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 BC048507Q80ZS7 89 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 1700001K19RikQ80ZT1 219 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 NrcamQ810U4 1256 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ppfia2Q8BSS9 1257 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Klhl7Q8BUL5 586 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Usp37Q8C0R0 979 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Lin9Q8C735 542 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Usp27Q8CEG8 438 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Lrrc45Q8CIM1 670 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 D630039A03RikQ8K0M7 236 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Dppa3Q8QZY3 150 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 PhykplQ8R1K4 467 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Gle1Q8R322 699 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Atp2a1Q8R429 994 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Reep2Q8VCD6 254 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 RnpepQ8VCT3 650 aaKnown RBP7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Zkscan3Q91VW9 553 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Dr1Q91WV0 176 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Eps8l2Q99K30 729 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Rassf3Q99P51 232 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Trim13Q9CYB0 407 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Q9CYI0 393 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Serpinb3bQ9D1Q5 387 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Krtap5-3Q9D226 196 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Cfap53Q9D439 514 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Ppp1r12aQ9DBR7 1029 aaKnown RBP7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Tlr5Q9JLF7 859 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Edf1Q9JMG1 148 aaKnown RBP7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Gfpt2Q9Z2Z9 682 aa7.53□□□□□ -1.2
Ccdc47-202ENSMUST00000106865 Tbc1d16A2ABG4 766 aa7.52□□□□□ -1.21
Ccdc47-202ENSMUST00000106865 Bpifb9bA2AJD1 591 aa7.52□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms