RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Ppp1r36D3Z0R2 411 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Shoc2O88520 582 aaKnown RBP16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Drg1P32233 367 aaKnown RBP16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Arid5aQ3U108 590 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Phlda1Q62392 405 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 VclQ64727 1066 aaKnown RBP16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Pan2Q8BGF7 1200 aaKnown RBP16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rnf8Q8VC56 488 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Fam111aQ9D2L9 613 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 SerhlQ9EPB5 311 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Kat2bQ9JHD1 813 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Cdr2lA2A6T1 465 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Pcdh9F8VPK8 1237 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 GsapQ3TCV3 858 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Mpzl3Q3V3F6 237 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Sel1l3Q80TS8 1137 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Dnph1Q80VJ3 173 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Fam53cQ8BXQ8 393 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 PdgfdQ925I7 370 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 PmpcbQ9CXT8 489 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Mss51Q9D5Z5 446 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Cyp2c55Q9D816 490 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Cib4Q9D9N5 185 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Tmem59Q9QY73 323 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Stau1Q9Z108 487 aaKnown RBP16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Osbpl10S4R1M9 766 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Kif13aQ9EQW7 1749 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 AtrnQ9WU60 1428 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Fgfr1P16092 822 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Sult1e1P49891 295 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Trmt1Q3TX08 663 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Prrg3Q6PAQ9 231 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Zfyve28Q6ZPK7 905 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Pnma2Q8BHK0 365 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Q8CIL4 281 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Stx11Q9D3G5 287 aa16.22■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Zbtb11G5E8B9 1050 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Yme1l1O88967 715 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Mov10P23249 1004 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 PuraP42669 321 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Coq7P97478 217 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Ksr1Q61097 873 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Smarcd1Q61466 515 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Iars2Q8BIJ6 1012 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 BicralQ8CHH5 1074 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Stk4Q9JI11 487 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Trpm5Q9JJH7 1158 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Arap3Q8R5G7 1538 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Gm5814J3QP80 125 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Irf6P97431 467 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Apoa1Q00623 264 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rbm20Q3UQS8 1199 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Hist2h2acQ64523 129 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Hist2h2aa1Q6GSS7 130 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Cspg5Q71M36 566 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rabl3Q9D4V7 236 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Poc5Q9DBS8 558 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Atf6F6VAN0 656 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Cdh16O88338 830 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Abi3bpQ59IW6 1179 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Arhgef19Q8BWA8 802 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Eif3lQ8QZY1 564 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 NclnQ8VCM8 563 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Heg1E9Q7X6 1337 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Scgb2b21A0A087WQA9 112 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Rrn3B2RS91 656 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 C1dO35473 141 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 TdgP56581 421 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 MyrfQ3UR85 1138 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Prkaa2Q8BRK8 552 aa16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Exd2Q8VEG4 650 aaKnown RBP16.21■□□□□ 0.19
Clcn3-203ENSMUST00000093490 Camta1A2A891 1682 aa16.21■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Smim10l2aA0A0B4J1F8 78 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Slc27a6E9Q9W4 619 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Pola2P33611 600 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Tulp2P46686 562 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Plk1Q07832 603 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Cdkl4Q3TZA2 342 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Ccdc61Q3UJV1 511 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Bcap31Q61335 245 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Prdm8Q8BZ97 687 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Sox30Q8CGW4 782 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Tspan14Q8QZY6 270 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Cstf3Q99LI7 717 aaKnown RBP16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 CoprsQ9CQ13 173 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Tubgcp4Q9D4F8 667 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Disp2Q8CIP5 1345 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Slfn3A0A1L1STQ7 640 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Barx2O08686 283 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Angpt2O35608 496 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Mbl1P39039 239 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Irf3P70671 419 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 S100gP97816 79 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Akap14Q3V0I7 536 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Myl6Q60605 151 aaKnown RBP16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Egfl8Q6GUQ1 293 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Rbbp8Q80YR6 893 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Gucy1b2Q8BXH3 824 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Mamdc2Q8CG85 686 aa16.2■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Uts2Q9QZQ3 123 aa16.2■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms