RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Qsox1Q8BND5 748 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Upb1Q8VC97 393 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 FtcdQ91XD4 541 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Trim7Q923T7 510 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 AadacQ99PG0 398 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 QpctQ9CYK2 362 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 4930513O06RikQ9D549 161 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tmbim4Q9DA39 238 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 PolhQ9JJN0 694 aa10.12□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Myo18aQ9JMH9 2050 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ccdc175E9PVB3 822 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 ShdO88834 343 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 PrkcdP28867 674 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 NrlP54846 237 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Kcnq1P97414 668 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Pdss1Q33DR2 409 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 ADGRF3Q58Y75 991 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 ScapQ6GQT6 1276 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fbxo44Q8BK26 255 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Exd1Q8CDF7 570 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Myoz3Q8R4E4 245 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ddx1Q91VR5 740 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Me2Q99KE1 589 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fam3aQ9D8T0 230 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ap2b1Q9DBG3 937 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 B3galt4Q9Z0F0 371 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Serpinb9O08797 374 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Pex2P55098 305 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Nlrc4Q3UP24 1024 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Zbtb16Q3UQ17 673 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Mbtd1Q6P5G3 631 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fam107aQ78TU8 144 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 PolnQ7TQ07 864 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Lrrc27Q80YS5 523 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 SowahaQ8BLS7 548 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 NaprtQ8CC86 538 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Prpsap2Q8R574 369 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Clptm1Q8VBZ3 664 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Taf11Q99JX1 211 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Actr3Q99JY9 418 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 MutyhQ99P21 515 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Gdap2Q9DBL2 498 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Iigp1Q9QZ85 413 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tle6Q9WVB3 581 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Top3bQ9Z321 862 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Gm17535J3KMR8 224 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Gm3187M0QWW3 260 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ebf3O08791 596 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Timm44O35857 452 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tnk2O54967 1055 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Cyp2a4P15392 494 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Cyp2a5P20852 494 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 MipP51180 263 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 CstaP56567 97 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Papss1Q60967 624 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 FcgrtQ61559 365 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fam214aQ69ZK7 1075 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fbxo41Q6NS60 873 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Psd2Q6P1I6 770 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Olfr299Q7TS05 330 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ahcyl1Q80SW1 530 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ppme1Q8BVQ5 386 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Unc45bQ8CGY6 931 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ube2q2Q8K2Z8 378 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Gga1Q8R0H9 635 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tmem82Q8R115 356 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Grk2Q99MK8 689 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Fut2Q9JL27 347 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Dach1Q9QYB2 751 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Hic1Q9R1Y5 733 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 TfebQ9R210 475 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Akt3Q9WUA6 479 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Tspoap1Q7TNF8 1846 aa10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ep400Q8CHI8 3072 aaKnown RBP10.11□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Gm8909G3UXE9 396 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 FaahO08914 579 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Grpel2O88396 224 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Myl4P09541 193 aaKnown RBP10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 ItgavP43406 1044 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 PolgP54099 1218 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Atp6v1b2P62814 511 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Dnajc6Q80TZ3 938 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Spata21Q8BHW6 681 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 BoraQ8BS90 525 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Trim35Q8C006 501 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ubap2Q91VX2 1132 aaKnown RBP10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Pcdhgb1Q91XX8 918 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 PmpcbQ9CXT8 489 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 TtpalQ9D3D0 343 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 PllpQ9DCU2 182 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Disp2Q8CIP5 1345 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Arhgef26D3YYY8 869 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ptar1E9QAB6 424 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Ccnb1P24860 430 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 SnnP61807 88 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Serpina6Q06770 397 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Lrrc14bQ3UJB3 510 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Trappc3lQ4KL14 181 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Htr1aQ64264 421 aa10.1□□□□□ -0.79
Ccdc40-202ENSMUST00000053440 Kctd12Q6WVG3 327 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms