RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Olfr1505Q7TQQ2 316 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Spata21Q8BHW6 681 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 MtbpQ8BJS8 894 aaKnown RBP13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Slc9a9Q8BZ00 644 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Lamtor4Q8CF66 99 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Lyrm1Q9CQB7 122 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Q9CYI0 393 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Clca1Q9D7Z6 913 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Borcs5Q9D920 195 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tbx20Q9ES03 445 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ruvbl2Q9WTM5 463 aaKnown RBP13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ptgdr2Q9Z2J6 382 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Hoxc10P31257 342 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Serpina1eQ00898 413 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mcm9Q2KHI9 1134 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Creb3Q61817 404 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Zfp512bQ6PHP4 879 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Spata20Q80YT5 790 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gtse1Q8R080 741 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ap3m2Q8R2R9 418 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Plekha4Q8VC98 588 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Fam227bQ9D518 532 aa13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 PrccQ9EQC8 491 aaKnown RBP13.13□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Smok3cA0A087WSF2 504 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ccdc194A0A140LIT1 234 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Map7d3A2AEY4 876 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Kifc5bE9PUA5 672 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Zfp850J3QPC5 689 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Nat8lQ3UGX3 299 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tmem26Q3UP23 366 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm5431Q5NCB3 844 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Inpp4bQ6P1Y8 924 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Cand2Q6ZQ73 1235 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tas2r102Q7M717 329 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Dupd1Q8BK84 215 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Slc44a2Q8BY89 706 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 TbcelQ8C5W3 424 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Trim32Q8CH72 655 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Upb1Q8VC97 393 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Sgsm3Q8VCZ6 750 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Bco2Q99NF1 532 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Fads3Q9JJE7 449 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ccdc120A2AEV7 629 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm4846B2RWH8 538 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm8257E9Q8R3 264 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ifi206G3UZV2 921 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Abcb1bP06795 1276 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 ThraP63058 492 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Cd36Q08857 472 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Wdr36Q3TAQ9 899 aaKnown RBP13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 FcgrtQ61559 365 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gpr150Q8BL07 427 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Lig4Q8BTF7 911 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Cnot6Q8K3P5 557 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mrpl57Q9CQF8 102 aaKnown RBP13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Nup50Q9JIH2 466 aaKnown RBP13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Dock5B2RY04 1868 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tulp2P46686 562 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 AaasP58742 546 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Psmb4P99026 264 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Lgr6Q3UVD5 967 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Sv2cQ69ZS6 727 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Scd4Q6T707 353 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 4930503B20RikQ80ZP0 234 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Sec24bQ80ZX0 1251 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Q8BHN7 327 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Vps39Q8R5L3 886 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Slc25a3Q8VEM8 357 aaKnown RBP13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 SmtnQ921U8 923 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Olfr711Q9EPG2 314 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 IvdQ9JHI5 424 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Twf2Q9Z0P5 349 aaKnown RBP13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Cntnap2Q9CPW0 1332 aa13.12□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ecm29Q6PDI5 1840 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Rhox3fA2ANE1 215 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm4871D3Z0W7 314 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 AmacrO09174 381 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ctnnd2O35927 1247 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Zfp217Q3U0X6 1041 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Zic5Q7TQ40 622 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Sel1l3Q80TS8 1137 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Alkbh8Q80Y20 664 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Zbtb41Q811F1 908 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Trmt13Q8BYH3 481 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Kbtbd13Q8C828 458 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mrpl47Q8K2Y7 252 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Stx18Q8VDS8 334 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mfsd5Q921Y4 450 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Rhobtb1Q9DAK3 695 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Kat2bQ9JHD1 813 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 4930469K13RikA0A286YDB2 92 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Epb41l4aP52963 686 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Arpp19P56212 112 aaKnown RBP13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Trim17Q7TPM3 477 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Stk32aQ8BGW6 398 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Zfp398Q8BV16 643 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gtf3c6Q9D8P7 227 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tmbim4Q9DA39 238 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Fundc1Q9DB70 155 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Capn10Q9ESK3 666 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms