RNA–Protein interactions for RNA: ENST00000641012.1

MACF1-234, Transcript of microtubule-actin crosslinking factor 1, humanhuman

BASIC

Gene MACF1, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-234ENST00000641012 SNX19Q92543 992 aa11.34□□□□□ -0.59
MACF1-234ENST00000641012 THOC1Q96FV9 657 aaKnown RBP11.34□□□□□ -0.59
MACF1-234ENST00000641012 ERP44Q9BS26 406 aa11.34□□□□□ -0.59
MACF1-234ENST00000641012 TMEM161AQ9NX61 479 aa11.34□□□□□ -0.59
MACF1-234ENST00000641012 ARHGEF38Q9NXL2 777 aa11.34□□□□□ -0.59
MACF1-234ENST00000641012 DERAQ9Y315 318 aa11.34□□□□□ -0.59
MACF1-234ENST00000641012 POLBP06746 335 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 ITGA8P53708 1063 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 OCRLQ01968 901 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 SPIRE1Q08AE8 756 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 CCDC38Q502W7 563 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 C3orf62Q6ZUJ4 267 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 ARHGAP24Q8N264 748 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 NOA1Q8NC60 698 aaKnown RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 SMG7Q92540 1137 aaKnown RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 PPP1R2P1Q96PQ5 205 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 DCLK3Q9C098 648 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 MFSD1Q9H3U5 465 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 EOMESO95936 686 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 UGP2Q16851 508 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 FBXO46Q6PJ61 603 aaPredicted RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 FAM228AQ86W67 206 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 PDZD8Q8NEN9 1154 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 USP13Q92995 863 aaPredicted RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 PTPN18Q99952 460 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 GTSE1Q9NYZ3 720 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 OR12D3Q9UGF7 316 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 DNMT3LQ9UJW3 386 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 MORC2Q9Y6X9 1032 aaPredicted RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 SUN1O94901 812 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 HIST1H2AGP0C0S8 130 aaPredicted RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 GFAPP14136 432 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 CHRM3P20309 590 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 HIST1H2ADP20671 130 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 GEMP55040 296 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 MAGOHP61326 146 aaKnown RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 LAMB3Q13751 1172 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 USP10Q14694 798 aaKnown RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 PKN2Q16513 984 aaKnown RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 PSRC1Q6PGN9 363 aaPredicted RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 FAM47EQ6ZV65 393 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 EPM2AIP1Q7L775 607 aaPredicted RBP11.33□□□□□ -0.6
MACF1-234ENST00000641012 HIST1H2AHQ96KK5 128 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 HIST1H2AJQ99878 128 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 H2AFJQ9BTM1 129 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 RPS6KL1Q9Y6S9 549 aa11.33□□□□□ -0.6
MACF1-234ENST00000641012 KPNA3O00505 521 aaPredicted RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 PCDH8O95206 1070 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 PDAP1Q13442 181 aaKnown RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 SPARCL1Q14515 664 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 CCDC157Q569K6 752 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 RAP1GAP2Q684P5 730 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 MFSD7Q6UXD7 560 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 TNS4Q8IZW8 715 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 MAB21L3Q8N8X9 362 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 RNF39Q9H2S5 420 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.32□□□□□ -0.63e-6■■□□□ 14.1
MACF1-234ENST00000641012 HSPA1AP0DMV8 641 aaKnown RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 HSPA1BP0DMV9 641 aaKnown RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 RASSF2P50749 326 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 TAF10Q12962 218 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 TAPT1Q6NXT6 567 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 FAM183BPQ6ZVS7 135 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 ECHDC2Q86YB7 292 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 IRF2BP1Q8IU81 584 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 DENND1CQ8IV53 801 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 MAML1Q92585 1016 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 SCUBE2Q9NQ36 999 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 CACNG4Q9UBN1 327 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 A0A0A6YYK5 440 aaPredicted RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 NVLO15381 856 aaKnown RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 ATP8B1O43520 1251 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 SERPINF2P08697 491 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 ACADMP11310 421 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 ADCK2Q7Z695 626 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 LINC00523Q86TU6 105 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 B3GNT5Q9BYG0 378 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 GANQ9H2C0 597 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 AVENQ9NQS1 362 aaPredicted RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 C2orf81A6NN90 581 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 HMGB1P1B2RPK0 211 aaPredicted RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 TRDMT1O14717 391 aaKnown RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 SLC9A3R1O14745 358 aaPredicted RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 TADA3O75528 432 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 NCF2P19878 526 aaPredicted RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 MAP4P27816 1152 aaKnown RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 CARSP49589 748 aaKnown RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 RENBPP51606 427 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 MAP3K10Q02779 954 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 PPP2R2DQ66LE6 453 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 ATG16L1Q676U5 607 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 TMEM192Q8IY95 271 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 ZSWIM2Q8NEG5 633 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 FOPNLQ96NB1 174 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 DUSP16Q9BY84 665 aa11.32□□□□□ -0.6
MACF1-234ENST00000641012 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.32□□□□□ -0.6
MACF1-234ENST00000641012 AAR2Q9Y312 384 aaKnown RBP11.32□□□□□ -0.6
MACF1-234ENST00000641012 ZNF197O14709 1029 aa11.31□□□□□ -0.6
MACF1-234ENST00000641012 CHKAP35790 457 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms