RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 DEC1Q9P2X7 70 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 MYOM1P52179 1685 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 CCDC78A2IDD5 438 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 PPP1R3GB7ZBB8 358 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 F5H423 210 aaPredicted RBP12.12□□□□□ -0.47
CHD2-205ENST00000625662 QSOX1O00391 747 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 ATG13O75143 517 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 DNAJC8O75937 253 aaPredicted RBP12.12□□□□□ -0.47
CHD2-205ENST00000625662 DDHD2O94830 711 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 PCK1P35558 622 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 RAP1GDS1P52306 607 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 FIGNQ5HY92 759 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 SH3BP5LQ7L8J4 393 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 MYO1HQ8N1T3 1032 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 C1orf54Q8WWF1 131 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 MYLPFQ96A32 169 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 PNMA5Q96PV4 448 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 ASPSCR1Q9BZE9 553 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 UPF3AQ9H1J1 476 aaKnown RBP12.12□□□□□ -0.47
CHD2-205ENST00000625662 PDZK1P1A8MUH7 402 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 MICAL2O94851 1124 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 GJA9P57773 515 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 POU5F1Q01860 360 aaKnown RBP12.12□□□□□ -0.47
CHD2-205ENST00000625662 ACOX1Q15067 660 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 ARMC12Q5T9G4 340 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 MTSS1LQ765P7 747 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 EXD1Q8NHP7 514 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 IL31RAQ8NI17 732 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 MAGEC3Q8TD91 643 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 UNC93B1Q9H1C4 597 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 A0A1W2PQ67 120 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 TBC1D4O60343 1298 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 PMPCBO75439 489 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 MTHFRP42898 656 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 GRSF1Q12849 480 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHD2-205ENST00000625662 HSDL1Q3SXM5 330 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 B3GALNT2Q8NCR0 500 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 DTNBP1Q96EV8 351 aa12.12□□□□□ -0.47
CHD2-205ENST00000625662 POP1Q99575 1024 aaKnown RBP12.12□□□□□ -0.47
CHD2-205ENST00000625662 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 BMP10O95393 424 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 DDX6P26196 483 aaKnown RBP eCLIP12.11□□□□□ -0.478e-10■■■□□ 17.7
CHD2-205ENST00000625662 PSMD7P51665 324 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 LRRC32Q14392 662 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 USP10Q14694 798 aaKnown RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 CNGA2Q16280 664 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 CLEC16AQ2KHT3 1053 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHD2-205ENST00000625662 GDAP1L1Q96MZ0 367 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 BBS2Q9BXC9 721 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 OSGEPL1Q9H4B0 414 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 LIG3P49916 1009 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 TOB1P50616 345 aaPredicted RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 ARHGDIAP52565 204 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 NCKAP1LP55160 1127 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 MPPE1Q53F39 396 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 MON1AQ86VX9 555 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 FAM131BQ86XD5 332 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 ZNF655Q8N720 491 aaPredicted RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 DBF4BQ8NFT6 615 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 GMLQ99445 158 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 PRKD2Q9BZL6 878 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 ULBP1Q9BZM6 244 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 ZFP14Q9HCL3 533 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 FGFR1OP2Q9NVK5 253 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 NDE1Q9NXR1 346 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 TBK1Q9UHD2 729 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 XPO7Q9UIA9 1087 aaKnown RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 TTC36A6NLP5 189 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 FOXN3O00409 490 aaPredicted RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 SLC2A4P14672 509 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 CDH8P55286 799 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 SYCP2LQ5T4T6 812 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 TTC39BQ5VTQ0 682 aaPredicted RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 CHPFQ8IZ52 775 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 TDRD5Q8NAT2 981 aaKnown RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 EDEM1Q92611 657 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 APOL5Q9BWW9 433 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 KIAA1522Q9P206 1035 aaPredicted RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 USP18Q9UMW8 372 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 L3MBTL1Q9Y468 752 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 ADGRG1Q9Y653 693 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 DYTNA2CJ06 578 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 NR2C2P49116 596 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 SCNN1BP51168 640 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 ORC1Q13415 861 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 TMEM161BQ8NDZ6 487 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 VPS37AQ8NEZ2 397 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 CXorf38Q8TB03 319 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 LRRC40Q9H9A6 602 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 CLDND1Q9NY35 253 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 APOBEC2Q9Y235 224 aaKnown RBP12.11□□□□□ -0.47
CHD2-205ENST00000625662 CASZ1Q86V15 1759 aa12.11□□□□□ -0.47
CHD2-205ENST00000625662 A0A088AWK7 358 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms