RNA–Protein interactions for RNA: ENST00000619290.4

CYFIP1-210, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-210ENST00000619290 ELOVL4Q9GZR5 314 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 SNX25Q9H3E2 840 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 BLOC1S4Q9NUP1 217 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 MARK1Q9P0L2 795 aa13.02□□□□□ -0.33
CYFIP1-210ENST00000619290 GOLGA8IPA6NC78 632 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 GOLGA8JA6NMD2 632 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 H0Y8X5 98 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 CLDN5O00501 218 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 SYNCRIPO60506 623 aaKnown RBP13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 GREM1O60565 184 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 LDHAP00338 332 aaKnown RBP13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 IGLV3-19P01714 112 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 ACADMP11310 421 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 GNL1P36915 607 aaPredicted RBP13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 IL12RB1P42701 662 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 TUBP50607 506 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 KCNC4Q03721 635 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 TLE3Q04726 772 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 KCNA1Q09470 495 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 CCDC173Q0VFZ6 552 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 TARDBPQ13148 414 aaKnown RBP eCLIP13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 INAVAQ3KP66 663 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 SNX30Q5VWJ9 437 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 LAYNQ6UX15 382 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 HTR3DQ70Z44 454 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 LURAP1LQ8IV03 231 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 FAM181AQ8N9Y4 354 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 SCAMP5Q8TAC9 235 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 RAD54LQ92698 747 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 FGF11Q92914 225 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 BHMTQ93088 406 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 HVCN1Q96D96 273 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 ANKRD36BP1Q96IX9 119 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 MRPL45Q9BRJ2 306 aaKnown RBP13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 NRSN2Q9GZP1 204 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 C6orf106Q9H6K1 298 aaPredicted RBP13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 TM9SF3Q9HD45 589 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 NME7Q9Y5B8 376 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 PCDHGA1Q9Y5H4 931 aa13.01□□□□□ -0.33
CYFIP1-210ENST00000619290 PTPRJQ12913 1337 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 PTPN1P18031 435 aaKnown RBP13□□□□□ -0.33
CYFIP1-210ENST00000619290 DDIT3P35638 169 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 GRIA4P48058 902 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 ZNF132P52740 706 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 HMGN5P82970 282 aaKnown RBP13□□□□□ -0.33
CYFIP1-210ENST00000619290 RTP5Q14D33 572 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 SFR1Q86XK3 245 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 OR5B17Q8NGF7 314 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 OR6B3Q8NGW1 331 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 TMEM176AQ96HP8 235 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 KCNK16Q96T55 309 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 ARID3AQ99856 593 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 B3GNT5Q9BYG0 378 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 PCED1AQ9H1Q7 454 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 DPEP3Q9H4B8 488 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13□□□□□ -0.332e-9■■■■■ 223.6
CYFIP1-210ENST00000619290 INTS13Q9NVM9 706 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 PLK2Q9NYY3 685 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 THAP10Q9P2Z0 257 aaPredicted RBP13□□□□□ -0.33
CYFIP1-210ENST00000619290 EXOC7Q9UPT5 735 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 MGAQ8IWI9 3026 aa13□□□□□ -0.33
CYFIP1-210ENST00000619290 ATMQ13315 3056 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 CBX4O00257 560 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 ENC1O14682 589 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 NPC1O15118 1278 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 SLC26A4O43511 780 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 RFPL3O75679 317 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 PPP1R37O75864 691 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 TNNC2P02585 160 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 UBA7P41226 1012 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 COPAP53621 1224 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 SLC5A3P53794 718 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 CDH8P55286 799 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 DNAJC3Q13217 504 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 RILPL1Q5EBL4 403 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 KCNT1Q5JUK3 1230 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 HES3Q5TGS1 186 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 USP49Q70CQ1 688 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 SPACA3Q8IXA5 215 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 RASSF8Q8NHQ8 419 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 AK8Q96MA6 479 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 ACCSQ96QU6 501 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 CBWD1Q9BRT8 395 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 STRA6Q9BX79 667 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 KLF16Q9BXK1 252 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 PCIF1Q9H4Z3 704 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 OSGEPQ9NPF4 335 aa12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 LSM7Q9UK45 103 aaKnown RBP12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-210ENST00000619290 KNL1Q8NG31 2342 aa12.98□□□□□ -0.33
CYFIP1-210ENST00000619290 B8ZZF3 427 aa12.98□□□□□ -0.33
CYFIP1-210ENST00000619290 BRINP1O60477 761 aa12.98□□□□□ -0.33
CYFIP1-210ENST00000619290 TLR5O60602 858 aa12.98□□□□□ -0.33
CYFIP1-210ENST00000619290 TACC1O75410 805 aa12.98□□□□□ -0.33
CYFIP1-210ENST00000619290 LDOC1O95751 146 aaPredicted RBP12.98□□□□□ -0.33
CYFIP1-210ENST00000619290 TBX18O95935 607 aa12.98□□□□□ -0.33
CYFIP1-210ENST00000619290 C1SP09871 688 aa12.98□□□□□ -0.33
CYFIP1-210ENST00000619290 ZDHHC11BP0C7U3 371 aa12.98□□□□□ -0.33
CYFIP1-210ENST00000619290 CDK4P11802 303 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms